Evidence map›Paper›PMID 32366946›Full record

ArticleScientific reports2020

Transcriptomic profiles reveal differences in zinc metabolism, inflammation, and tight junction proteins in duodenum from cholesterol gallstone subjects.

Eleodoro Riveras, Lorena Azocar, Tomas C Moyano, Marcia Ocares, Hector Molina, Diego Romero, Juan C Roa, Jose R Valbuena, Rodrigo A Gutiérrez, Juan F Miquel

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.6field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Eleodoro RiverasDepartamento de Gastroenterología. Facultad de Medicina. Pontificia Universidad Católica de Chile, Santiago, Chile.
Lorena AzocarDepartamento de Gastroenterología. Facultad de Medicina. Pontificia Universidad Católica de Chile, Santiago, Chile.
Tomas C MoyanoMillennium Institute for Integrative Biology, iBio. FONDAP Center for Genome Regulation. Departamento de Genética Molecular y Microbiología. Facultad de Ciencias Biológicas. Pontificia Universidad Católica de Chile, Santiago, Chile.
Marcia OcaresDepartamento de Gastroenterología. Facultad de Medicina. Pontificia Universidad Católica de Chile, Santiago, Chile.
Hector MolinaDepartamento de Gastroenterología. Facultad de Medicina. Pontificia Universidad Católica de Chile, Santiago, Chile.
Diego RomeroDepartamento de Anatomía Patológica. Facultad de Medicina. Pontificia Universidad Católica de Chile, Santiago, Chile.
Juan C RoaDepartamento de Anatomía Patológica. Facultad de Medicina. Pontificia Universidad Católica de Chile, Santiago, Chile.
Jose R ValbuenaDepartamento de Anatomía Patológica. Facultad de Medicina. Pontificia Universidad Católica de Chile, Santiago, Chile.
Rodrigo A GutiérrezMillennium Institute for Integrative Biology, iBio. FONDAP Center for Genome Regulation. Departamento de Genética Molecular y Microbiología. Facultad de Ciencias Biológicas. Pontificia Universidad Católica de Chile, Santiago, Chile.
Juan F MiquelDepartamento de Gastroenterología. Facultad de Medicina. Pontificia Universidad Católica de Chile, Santiago, Chile. jfmiquelp@uc.cl.
Pontificia Universidad Católica de Chile · CLMillennium Institute for Integrative Biology · CL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cholesterol Gallstone Disease (GSD) is a common multifactorial disorder characterized by crystallization and aggregation of biliary cholesterol in the gallbladder. The global prevalence of GSD is ~10-20% in the adult population but rises to 28% in Chile (17% among men and 30% among women). The small intestine may play a role in GSD pathogenesis, but the molecular mechanisms have not been clarified. Our aim was to identify the role of the small intestine in GSD pathogenesis. Duodenal biopsy samples were obtained from patients with GSD and healthy volunteers. GSD status was defined by abdominal ultrasonography. We performed a transcriptome study in a discovery cohort using Illumina HiSeq. 2500, and qPCR, immunohistochemistry and immunofluorescence were used to validate differentially expressed genes among additional case-control cohorts. 548 differentially expressed genes between GSD and control subjects were identified. Enriched biological processes related to cellular response to zinc, and immune and antimicrobial responses were observed in GSD patients. We validated lower transcript levels of metallothionein, NPC1L1 and tight junction genes and higher transcript levels of genes involved in immune and antimicrobial pathways in GSD patients. Interestingly, serum zinc and phytosterol to cholesterol precursor ratios were lower in GSD patients. A significant association was observed between serum zinc and phytosterol levels. Our results support a model where proximal small intestine plays a key role in GSD pathogenesis. Zinc supplementation, modulation of proximal microbiota and/or intestinal barrier may be novel targets for strategies to prevent GSD.

Indexed as

AdultBiopsyCholelithiasisCholesterolDuodenumFemaleGene Expression RegulationHumansInflammationMaleMembrane Transport ProteinsMetallothioneinMicrobiotaPrevalenceRisk FactorsRNA-SeqCholesterolMembrane Transport ProteinsMetallothioneinMT1A protein, humanNPC1L1 protein, humanTight Junction ProteinsZinc

Identifiers

PMID32366946
PMCPMC7198580
OpenAlexW3023015560

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.