Evidence map›Paper›PMID 32366330›Full record

ArticleBMC genomics2020

The metabolome as a link in the genotype-phenotype map for peroxide resistance in the fruit fly, Drosophila melanogaster.

Benjamin R Harrison, Lu Wang, Erika Gajda, Elise V Hoffman, Brian Y Chung, Scott D Pletcher, Daniel Raftery, Daniel E L Promislow

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.7field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 26 citations in OpenAlex.

  1. Naturally Occurring Variability in the Regulatory Region of theInternational journal of molecular sciences · 2026
    Article
  2. Article
  3. Tissue-specific metabolomic signatures for aRoyal Society open science · 2025
    Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. KL1 Domain of Longevity Factor Klotho Mimics the Metabolome of Cognitive Stimulation and Enhances Cognition in Young and Aging Mice.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2022
    Article
  10. A Metabolomic Aging Clock Using Human Cerebrospinal Fluid.The journals of gerontology. Series A, Biological sciences and medical sciences · 2022
    Article
  11. Article
  12. Extending human healthspan and longevity: a symposium report.Annals of the New York Academy of Sciences · 2022
    Article
  13. Article
  14. Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Benjamin R HarrisonDepartment of Pathology, University of Washington School of Medicine, Seattle, WA, 98195, USA. ben6@uw.edu.ORCID http://orcid.org/0000-0002-4268-7686
Lu WangDepartment of Environmental and Occupational Health Sciences, University of Washington, Seattle, WA, 98105, USA.
Erika GajdaDepartment of Pathology, University of Washington School of Medicine, Seattle, WA, 98195, USA.
Elise V HoffmanDepartment of Pathology, University of Washington School of Medicine, Seattle, WA, 98195, USA.
Brian Y ChungDepartment of Molecular and Integrative Physiology, University of Michigan, Ann Arbor, MI, 48109, USA.
Scott D PletcherDepartment of Molecular and Integrative Physiology, University of Michigan, Ann Arbor, MI, 48109, USA.
Daniel RafteryNorthwest Metabolomics Research Center, Department of Anesthesiology & Pain Medicine, University of Washington, Seattle, WA, 98195, USA.
Daniel E L PromislowDepartment of Pathology, University of Washington School of Medicine, Seattle, WA, 98195, USA.
University of Washington · USUniversity of Michigan · US

Funding

University of Washington Nathan Shock Center of Excellence in the Basic Biology of AgingP30AG013280 · NIA · UNIVERSITY OF WASHINGTON · PI Michael MacCoss · 1995 to 2026
$27.1M
Regional Pilot And Feasibility Study Grants ProgramP30DK020572 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Mehboob A Hussain · 2013 to 2026
$24.3M
Modulation of aging by Sensory PerceptionR01AG030593 · NIA · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI PLETCHER, SCOTT · 2007 to 2025
$6.1M
Modulation of aging through mechanisms of nutrient demand and rewardR37AG051649 · NIA · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI SCOTT PLETCHER · 2021 to 2026
$2.3M
The role of neural signaling pathways in costs of reproduction on agingR01AG063371 · NIA · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI PLETCHER, SCOTT, PROMISLOW, DANIEL EDWARD · 2019 to 2023
$1.9M
Metabolome-Genome Associations for Determining Mechanisms of Aging in DrosophilaR01AG049494 · NIA · UNIVERSITY OF WASHINGTON · PI PROMISLOW, DANIEL EDWARD · 2015 to 2019
$1.8M
NIA NIH HHS AG013280NIA NIH HHS AG049494NIA NIH HHS P30 AG013280NIA NIH HHS R01 AG030593NIA NIH HHS R01 AG049494NIA NIH HHS R01 AG063371NIA NIH HHS R37 AG051649NIDDK NIH HHS P30 DK020572
6 · The paper itself

Abstract

backgroundGenetic association studies that seek to explain the inheritance of complex traits typically fail to explain a majority of the heritability of the trait under study. Thus, we are left with a gap in the map from genotype to phenotype. Several approaches have been used to fill this gap, including those that attempt to map endophenotype such as the transcriptome, proteome or metabolome, that underlie complex traits. Here we used metabolomics to explore the nature of genetic variation for hydrogen peroxide (H

resultsWe first studied genetic variation for H

conclusionsThis work suggests that the metabolome can be a point of convergence for genetic variation influencing complex traits, and can efficiently elucidate mechanisms underlying trait variation.

Indexed as

MetabolomeAnimalsDrosophila melanogasterFemaleFolic AcidGenes, InsectGenetic VariationGenome, InsectGenotypeGlycogenHydrogen PeroxideMetabolic Networks and PathwaysMultifactorial InheritanceOxidative StressPhenotypeFolic AcidGlycogenHydrogen PeroxideComplex traitDrosophilaEndophenotypeGenetic variationGWASHydrogen peroxideMetabolomeOxidative stressQuantitative geneticsStarvation

Identifiers

PMID32366330
PMCPMC7199327
OpenAlexW3022469880

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.