Evidence map›Paper›PMID 32366025›Full record

ArticleViruses2020

Codon Usage and Phenotypic Divergences of SARS-CoV-2 Genes.

Maddalena Dilucca, Sergio Forcelloni, Alexandros G Georgakilas, Andrea Giansanti, Athanasia Pavlopoulou

Open access · goldAbstract read
In one paragraph

Article in Viruses, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 56 papers.

0numbers the graph read from it
0cells of the map it votes in
56citing papers in PubMed
8.0field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

56 citing papers in PubMed, 104 citations in OpenAlex.

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  12. Correlated substitutions reveal SARS-like coronaviruses recombine frequently with a diverse set of structured gene pools.Proceedings of the National Academy of Sciences of the United States of America · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 3 countries.

Maddalena DiluccaPhysics Department, Sapienza University of Rome, 00185, Rome, Italy.ORCID 0000-0002-2179-4677
Sergio ForcelloniPhysics Department, Sapienza University of Rome, 00185, Rome, Italy.
Alexandros G GeorgakilasDNA Damage Laboratory, Physics Department, School of Applied Mathematical and Physical Sciences, National Technical University of Athens (NTUA), Zografou Campous, 15780 Athens, Greece.ORCID 0000-0002-5971-0010
Andrea GiansantiPhysics Department, Sapienza University of Rome, 00185, Rome, Italy.
Athanasia PavlopoulouIzmir Biomedicine and Genome Center (IBG), 35340 Balcova, Izmir, Turkey.ORCID 0000-0002-0815-3808
Sapienza University of Rome · ITDokuz Eylül University · TRIstituto Nazionale di Fisica Nucleare, Sezione di Roma I · ITNational Technical University of Athens · GR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), which first occurred in Wuhan (China) in December of 2019, causes a severe acute respiratory illness with a high mortality rate, and has spread around the world. To gain an understanding of the evolution of the newly emerging SARS-CoV-2, we herein analyzed the codon usage pattern of SARS-CoV-2. For this purpose, we compared the codon usage of SARS-CoV-2 with that of other viruses belonging to the subfamily of

Indexed as

CodonGenome, ViralBase CompositionBetacoronavirusBiological EvolutionCoronavirusGenes, ViralHost SpecificityMutationPhylogenySARS-CoV-2Codoncodon usage biascoronaviruseshost adaptationmutational biasnatural selectionSARS-CoV-2

Identifiers

PMID32366025
PMCPMC7290700
OpenAlexW3023883119

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.