Evidence map›Paper›PMID 32365758›Full record

ArticleGenes2020

Estimates of Autozygosity Through Runs of Homozygosity in Farmed Coho Salmon.

Grazyella M Yoshida, Pablo Cáceres, Rodrigo Marín-Nahuelpi, Ben F Koop, José M Yáñez

Open access · goldAbstract read
In one paragraph

Article in Genes, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 39 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Grazyella M YoshidaFacultad de Ciencias Veterinarias y Pecuarias, Universidad de Chile, Santiago 8820808, Chile.ORCID 0000-0002-6788-7369
Pablo CáceresFacultad de Ciencias Veterinarias y Pecuarias, Universidad de Chile, Santiago 8820808, Chile.
Rodrigo Marín-NahuelpiFacultad de Ciencias Veterinarias y Pecuarias, Universidad de Chile, Santiago 8820808, Chile.ORCID 0000-0002-6890-9144
Ben F KoopDepartment of Biology, Centre for Biomedical Research, University of Victoria, Victoria, BC V8W 2Y2, Canada.
José M YáñezFacultad de Ciencias Veterinarias y Pecuarias, Universidad de Chile, Santiago 8820808, Chile.
University of Chile · CLMillenium Nucleus for Planet Formation · CLUniversity of Victoria · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The characterization of runs of homozygosity (ROH), using high-density single nucleotide polymorphisms (SNPs) allows inferences to be made about the past demographic history of animal populations and the genomic ROH has become a common approach to characterize the inbreeding. We aimed to analyze and characterize ROH patterns and compare different genomic and pedigree-based methods to estimate the inbreeding coefficient in two pure lines (POP A and B) and one recently admixed line (POP C) of coho salmon (

Indexed as

GenomicsInbreedingAnimalsBreedingFisheriesGenomeGenotypeHomozygoteOncorhynchus kisutchPedigreePolymorphism, Single NucleotideadmixtureautozygosityinbreedingOncorhynchus kisutchpedigreerun of homozygosityruns of homozygosity

Identifiers

PMID32365758
PMCPMC7290985
OpenAlexW3022819373

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.