Evidence map›Paper›PMID 32365143›Full record

ArticlePLoS pathogens2020

The intergenic small non-coding RNA ittA is required for optimal infectivity and tissue tropism in Borrelia burgdorferi.

Diana N Medina-Pérez, Beau Wager, Erin Troy, Lihui Gao, Steven J Norris, Tao Lin, Linden Hu, Jenny A Hyde, Meghan Lybecker, Jon T Skare

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
5.2field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 21 citations in OpenAlex.

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  5. Virulence Regulation inMicroorganisms · 2025
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  6. Hitchhiker's Guide toJournal of bacteriology · 2024
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  12. Deletion of a Genetic Region of lp17 Affects Plasmid Copy Number inFrontiers in cellular and infection microbiology · 2022
    Article
  13. Article
  14. Live Imaging.Current issues in molecular biology · 2021
    Review
  15. Gene Regulation and Transcriptomics.Current issues in molecular biology · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 1 country.

Diana N Medina-PérezDepartment of Microbial Pathogenesis and Immunology, Texas A&M University Health Science Center, Bryan, Texas, United States of America.ORCID 0000-0001-5060-6279
Beau WagerDepartment of Molecular Biology and Microbiology, Tufts University, School of Medicine, Boston, Massachusetts, United States of America.
Erin TroyDepartment of Molecular Biology and Microbiology, Tufts University, School of Medicine, Boston, Massachusetts, United States of America.ORCID 0000-0001-5157-3683
Lihui GaoDepartment of Pathology and Laboratory Medicine, McGovern Medical School, University of Texas Health Science Center, Houston, Houston, Texas, United States of America.
Steven J NorrisDepartment of Pathology and Laboratory Medicine, McGovern Medical School, University of Texas Health Science Center, Houston, Houston, Texas, United States of America.
Tao LinDepartment of Pathology and Laboratory Medicine, McGovern Medical School, University of Texas Health Science Center, Houston, Houston, Texas, United States of America.
Linden HuDepartment of Molecular Biology and Microbiology, Tufts University, School of Medicine, Boston, Massachusetts, United States of America.ORCID 0000-0003-1659-5558
Jenny A HydeDepartment of Microbial Pathogenesis and Immunology, Texas A&M University Health Science Center, Bryan, Texas, United States of America.
Meghan LybeckerDepartment of Biology, University of Colorado at Colorado Springs, Colorado Springs, Colorado, United States of America.ORCID 0000-0002-4861-1463
Jon T SkareDepartment of Microbial Pathogenesis and Immunology, Texas A&M University Health Science Center, Bryan, Texas, United States of America.ORCID 0000-0001-8378-7862
Texas A&M Health Science Center · USThe University of Texas Health Science Center at Houston · USTufts University · USUniversity of Colorado Colorado Springs · US

Funding

Coping with Stress: Next Generation Approaches to Borrelia burgdorferi Host AdaptationR01AI131656 · NIAID · TUFTS UNIVERSITY BOSTON · PI HU, LINDEN T, SKARE, JON T · 2017 to 2021
$3.3M
The role of small non-coding RNA in borrelial pathogenesisR21AI123672 · NIAID · TEXAS A&M UNIVERSITY HEALTH SCIENCE CTR · PI HYDE, JENNY A., LYBECKER, MEGHAN · 2016 to 2017
$417k
NIAID NIH HHS R01 AI131656NIAID NIH HHS R21 AI123672
6 · The paper itself

Abstract

Post-transcriptional regulation via small regulatory RNAs (sRNAs) has been implicated in diverse regulatory processes in bacteria, including virulence. One class of sRNAs, termed trans-acting sRNAs, can affect the stability and/or the translational efficiency of regulated transcripts. In this study, we utilized a collaborative approach that employed data from infection with the Borrelia burgdorferi Tn library, coupled with Tn-seq, together with borrelial sRNA and total RNA transcriptomes, to identify an intergenic trans-acting sRNA, which we designate here as ittA for infectivity-associated and tissue-tropic sRNA locus A. The genetic inactivation of ittA resulted in a significant attenuation in infectivity, with decreased spirochetal load in ear, heart, skin and joint tissues. In addition, the ittA mutant did not disseminate to peripheral skin sites or heart tissue, suggesting a role for ittA in regulating a tissue-tropic response. RNA-Seq analysis determined that 19 transcripts were differentially expressed in the ittA mutant relative to its genetic parent, including vraA, bba66, ospD and oms28 (bba74). Subsequent proteomic analyses also showed a significant decrease of OspD and Oms28 (BBA74) proteins. To our knowledge this is the first documented intergenic sRNA that alters the infectivity potential of B. burgdorferi.

Indexed as

Borrelia burgdorferiGene Expression Regulation, BacterialGene LibraryGenome, BacterialLyme DiseaseProteomicsRNA, BacterialRNA, Small UntranslatedTranscriptomeTropismVirulenceRNA, BacterialRNA, Small Untranslated

Identifiers

PMID32365143
PMCPMC7224557
OpenAlexW3023782796

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.