Evidence map›Paper›PMID 32363413›Full record

ArticleMolecular biology reports2020

Expression dynamics of solute carrier family 15 member 4 (SLC15A4) and its potential regulatory role in ovarian development of the Indian white shrimp, Penaeus indicus.

P Saikrithi, C P Balasubramanian, Subhendu Kumar Otta, Sherly Tomy

Abstract read
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Article in Molecular biology reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.1field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 6 citations in OpenAlex.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

P SaikrithiNutrition, Genetics and Biotechnology Division, ICAR-Central Institute of Brackishwater Aquaculture, 75, Santhome High Road, MRC Nagar, R.A. Puram, Chennai, Tamil Nadu, 600028, India.ORCID http://orcid.org/0000-0002-5864-9502
C P BalasubramanianCrustacean Culture Division, ICAR-Central Institute of Brackishwater Aquaculture, 75, Santhome High Road, MRC Nagar, R.A. Puram, Chennai, Tamil Nadu, 600028, India.
Subhendu Kumar OttaAquatic Animal Health and Environment Division, ICAR-Central Institute of Brackishwater Aquaculture, 75, Santhome High Road, MRC Nagar, R.A. Puram, Chennai, Tamil Nadu, 600028, India.ORCID http://orcid.org/0000-0001-8785-3505
Sherly TomyNutrition, Genetics and Biotechnology Division, ICAR-Central Institute of Brackishwater Aquaculture, 75, Santhome High Road, MRC Nagar, R.A. Puram, Chennai, Tamil Nadu, 600028, India. sherly@ciba.res.in.ORCID http://orcid.org/0000-0003-4542-7967
Central Institute of Brackishwater Aquaculture · IN

Funding

Department of Biotechnology , Ministry of Science and Technology BT/PR5284/AAQ/3/593/2012
6 · The paper itself

Abstract

Solute carrier proteins (SLC) are essential membrane transport proteins responsible for transporting lipids, amino acids, sugars, neurotransmitters, and drugs across the biological membranes. Dysfunction of these carrier proteins may lead to an imbalance of biological mechanisms and also in the failure of the transporting pathways of several signaling neurotransmitters. In the present study, a 646 bp of a solute carrier protein (SLC15A4) was cloned and sequenced from the Indian white shrimp, Penaeus indicus. Multiple sequence alignment using ClustalW and phylogenetic analysis of putative SLC15A4 fragment from P. indicus (PiSLC15A4) was performed using Mega X tool. Tissue distribution analysis was carried out using real-time PCR. The differential expressions of PiSLC15A4 were also analyzed in the ovaries and brain tissues of wild-caught female shrimps at different maturation stages and in the brain tissues of captive females subjected to induce maturation by eyestalk ablation. Significant diversity in SLC15A4 sequence obtained from P. indicus was observed when compared to the other species. Tissue distribution analysis confirmed the ubiquitous expression of PiSLC15A4 in all the tissues examined. The differential expressions of PiSLC15A4 indicated higher expression of the gene in brain tissue of females at the vitellogenic stage, while the expressions in ovaries were significantly higher in the immature stage. The differential expressions of PiSLC15A4 in the brain tissues were substantially higher in eyestalk ablated shrimps compared to the eyestalk intact females. The study suggests a role for SLC15A4 in the endocrine signaling pathways stimulating ovarian maturation in P. indicus.

Indexed as

Amino Acid SequenceAnimalsCloning, MolecularFemaleMembrane Transport ProteinsOvaryPenaeidaePhylogenySequence AlignmentSex DifferentiationSolute Carrier ProteinsMembrane Transport ProteinsSlc15a4 protein, mouseSolute Carrier ProteinsEyestalk ablationMembrane transport proteinsNeurotransmittersOvarian developmentPenaeus indicusSolute carrier protein

Identifiers

PMID32363413
OpenAlexW3022233338

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.