Evidence map›Paper›PMID 32362880›Full record

ArticleFrontiers in microbiology2020

A New Whole Genome Culture-Independent Diagnostic Test (WG-CIDT) for Rapid Detection of

Dele Ogunremi, Andrée Ann Dupras, Sohail Naushad, Ruimin Gao, Marc-Olivier Duceppe, Katayoun Omidi, Imelda Galván Márquez, Hongsheng Huang, Lawrence Goodridge, Roger C Lévesque and 5 more

Abstract read
In one paragraph

Article in Frontiers in microbiology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Review
  8. Advancement inBiosensors · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Dele OgunremiOttawa Laboratory Fallowfield, Canadian Food Inspection Agency, Ottawa, ON, Canada.
Andrée Ann DuprasOttawa Laboratory Fallowfield, Canadian Food Inspection Agency, Ottawa, ON, Canada.
Sohail NaushadOttawa Laboratory Fallowfield, Canadian Food Inspection Agency, Ottawa, ON, Canada.
Ruimin GaoOttawa Laboratory Fallowfield, Canadian Food Inspection Agency, Ottawa, ON, Canada.
Marc-Olivier DuceppeOttawa Laboratory Fallowfield, Canadian Food Inspection Agency, Ottawa, ON, Canada.
Katayoun OmidiOttawa Laboratory Fallowfield, Canadian Food Inspection Agency, Ottawa, ON, Canada.
Imelda Galván MárquezOttawa Laboratory Fallowfield, Canadian Food Inspection Agency, Ottawa, ON, Canada.
Hongsheng HuangOttawa Laboratory Fallowfield, Canadian Food Inspection Agency, Ottawa, ON, Canada.
Lawrence GoodridgeDepartment of Food Science and Agricultural Chemistry, McGill University, Sainte-Anne-de-Bellevue, QC, Canada.
Roger C LévesqueInstitut de Biologie Intégrative et des Systèmes, Université Laval, Quebec City, QC, Canada.
Nur A HasanCosmosID Inc., Rockville, MD, United States.
Manoj DadlaniCosmosID Inc., Rockville, MD, United States.
Brent DixonBureau of Microbial Hazards, Food Directorate, Health Canada, Ottawa, ON, Canada.
Sebastian MagierowskiDepartment of Electrical Engineering and Computer Science, York University, Toronto, ON, Canada.
Luke MassonNational Research Council of Canada, Montreal, QC, Canada.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The rapid detection of foodborne microbial pathogens contaminating fresh fruits and vegetables during the intervening period between harvest and consumption could revolutionize microbial quality assurance of food usually consumed raw and those with a limited shelf life. We have developed a sensitive, shotgun whole genome sequencing protocol capable of detecting as few as 1 colony forming unit (cfu) of

Indexed as

bioinformaticsculture-independentlettucemetagenomicsSalmonellawhole genome

Identifiers

PMID32362880
PMCPMC7181323

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.