Evidence map›Paper›PMID 32362116›Full record

ArticleAnalytical chemistry2020

Mapping and Identification of Native Proteins of Developing Teeth in Mouse Mandibles.

Madeline Colley, Sitai Liang, Chunyan Tan, Kyle P Trobough, Stephan B H Bach, Yong-Hee Patricia Chun

Open access · greenAbstract read
In one paragraph

Article in Analytical chemistry, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.3field-weighted citation impact, top 47% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Madeline ColleyDepartment of Chemistry, University of Texas-San Antonio, San Antonio, Texas 78249, United States.ORCID 0000-0002-9515-3493
Sitai LiangDepartment of Periodontics, University of Texas Health-San Antonio, San Antonio, Texas 78229, United States.
Chunyan TanDepartment of Periodontics, University of Texas Health-San Antonio, San Antonio, Texas 78229, United States.
Kyle P TroboughDepartment of Periodontics, University of Texas Health-San Antonio, San Antonio, Texas 78229, United States.
Stephan B H BachDepartment of Chemistry, University of Texas-San Antonio, San Antonio, Texas 78249, United States.
Yong-Hee Patricia ChunDepartment of Periodontics, University of Texas Health-San Antonio, San Antonio, Texas 78229, United States.
The University of Texas Health Science Center at San Antonio · USThe University of Texas at San Antonio · US

Funding

RCMI Center for Interdiscplinary Health Research CIHRG12MD007591 · NIMHD · UNIVERSITY OF TEXAS SAN ANTONIO · PI PERRY, GEORGE · 2012 to 2016
$10.4M
Enamel with overexpressed ameloblastinR01DE026769 · NIDCR · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI Yong-Hee Patricia Chun · 2017 to 2026
$3.3M
Ameloblastin concentration on enamel formationR21DE025758 · NIDCR · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI CHUN, YONG-HEE PATRICIA · 2016 to 2017
$431k
Enamel with overexpressed ameloblastinR56DE026769 · NIDCR · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI CHUN, YONG-HEE PATRICIA · 2022 to 2022
$360k
NIDCR NIH HHS R01 DE026769NIDCR NIH HHS R21 DE025758NIDCR NIH HHS R56 DE026769NIMHD NIH HHS G12 MD007591
6 · The paper itself

Abstract

Mass spectrometry imaging is a powerful tool of increasing utility due to its ability to spatially resolve molecular biomarkers directly from sectioned tissues. One hindrance to its universality is that no single protocol is sufficient for every tissue type, fixation, and pretreatment. Mineralized tissues are uniquely challenging as extensive decalcification protocols are necessary to achieve thin sections. In this study, we optimized a method to image tryptic peptides by matrix-assisted laser desorption ionization mass spectrometry of decalcified, formalin-fixed paraffin-embedded mouse hemimandibles. Using a combination of on-tissue MS/MS and hydrogel extraction LC-MS/MS, peptides from the enamel, dentin, periodontal ligament, alveolar bone, pulp, and other regions are identified and mapped. This breakthrough method provides a comprehensive approach to biomarker discovery in dental and craniofacial tissues which is highly relevant given that diseases originating from this region of the body are the most prevalent across all populations.

Indexed as

AnimalsChromatography, LiquidMandibleMiceMice, Inbred C57BLParaffin EmbeddingProteinsTandem Mass SpectrometryTissue FixationToothProteins

Identifiers

PMID32362116
PMCPMC7898936
OpenAlexW3023981571

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.