Evidence map›Paper›PMID 32361814›Full record

ArticleVirus genes2020

Effect of viral DNA methylation on expression of hepatitis B virus proteins depends on the virus genotype.

Takuya Nakamura, Jun Inoue, Masashi Ninomiya, Eiji Kakazu, Tomoaki Iwata, Satoshi Takai, Akitoshi Sano, Takayuki Kogure, Tooru Shimosegawa, Atsushi Masamune

Abstract read
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In one paragraph

Article in Virus genes, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.6field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 4 citations in OpenAlex.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Takuya NakamuraDivision of Gastroenterology, Tohoku University Graduate School of Medicine, Sendai, Japan.
Jun InoueDivision of Gastroenterology, Tohoku University Graduate School of Medicine, Sendai, Japan. jinoue-drgn@umin.net.ORCID http://orcid.org/0000-0003-1171-7835
Masashi NinomiyaDivision of Gastroenterology, Tohoku University Graduate School of Medicine, Sendai, Japan.
Eiji KakazuDivision of Gastroenterology, Tohoku University Graduate School of Medicine, Sendai, Japan.
Tomoaki IwataDivision of Gastroenterology, Tohoku University Graduate School of Medicine, Sendai, Japan.
Satoshi TakaiDivision of Gastroenterology, Tohoku University Graduate School of Medicine, Sendai, Japan.
Akitoshi SanoDivision of Gastroenterology, Tohoku University Graduate School of Medicine, Sendai, Japan.
Takayuki KogureDivision of Gastroenterology, Tohoku Medical and Pharmaceutical University Hospital, Sendai, Japan.
Tooru ShimosegawaDivision of Gastroenterology, Tohoku University Graduate School of Medicine, Sendai, Japan.
Atsushi MasamuneDivision of Gastroenterology, Tohoku University Graduate School of Medicine, Sendai, Japan.
Tohoku University · JPTohoku Medical and Pharmaceutical University Hospital · JP

Funding

Japan Society for the Promotion of Science 19K08385
6 · The paper itself

Abstract

The frequency of HBV genomic methylation in the liver was reported to vary among patients, but the detailed mechanism is still unknown. In this study, the effects of HBV genome methylation on HBV replication were investigated in vitro. A total of 6 plasmids containing 1.24-fold the HBV genome of different genotypes (subgenotypes A1, A2, B1, and C2) were purified after in vitro methylation with CpG methyltransferase (M.SssI) and transfected into HepG2 cells. In genotype B and C strains, methylation markedly decreased the amount of hepatitis B e antigen (HBeAg) in the culture supernatant. A reduction of hepatitis B surface antigen (HBsAg) was found in some HBV strains but the reduction was smaller than that of HBeAg. There was no significant difference in particle-associated HBV DNA in the culture supernatant. These findings suggest that HBV genomic methylation might be involved in the HBeAg decline in genotype B and C, in part, and that the reduction of HBsAg was less than that of HBeAg. In conclusion, this study showed that the effect of HBV genomic methylation differs among HBV genotypes, suggesting a potential explanation for the different clinical outcomes of genotypes A, B, and C.

Indexed as

DNA MethylationDNA, ViralGenotypeHepatitis B, ChronicHepatitis B e AntigensHepatitis B virusHep G2 CellsHumansVirus ReplicationDNA, ViralHepatitis B e AntigensGenotypeHBeAgHBsAgHBVMethylation

Identifiers

PMID32361814
OpenAlexW3022748655

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.