Evidence map›Paper›PMID 32358203›Full record

ArticleScience (New York, N.Y.)2020

Structural basis for inhibition of the RNA-dependent RNA polymerase from SARS-CoV-2 by remdesivir.

Wanchao Yin, Chunyou Mao, Xiaodong Luan, Dan-Dan Shen, Qingya Shen, Haixia Su, Xiaoxi Wang, Fulai Zhou, Wenfeng Zhao, Minqi Gao and 12 more

Open access · hybridAbstract read
In one paragraph

Article in Science (New York, N.Y.), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 684 papers.

0numbers the graph read from it
0cells of the map it votes in
684citing papers in PubMed
28.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

684 citing papers in PubMed, 1,283 citations in OpenAlex.

  1. Trial
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  6. Seamless QM/MM Simulations via a GROMACS-CP2K Interface.Journal of chemical information and modeling · 2026
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624 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors at 5 institutions in 1 country.

Wanchao Yin *The CAS Key Laboratory of Receptor Research, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai 201203, China.ORCID 0000-0002-6889-4907
Chunyou Mao *Department of Biophysics, and Department of Pathology of Sir Run Run Shaw Hospital, Zhejiang University School of Medicine, Hangzhou 310058, China.
Xiaodong Luan *School of Medicine, Tsinghua University, Haidian District, Beijing 100084, China.ORCID 0000-0002-1279-5432
Dan-Dan Shen *Department of Biophysics, and Department of Pathology of Sir Run Run Shaw Hospital, Zhejiang University School of Medicine, Hangzhou 310058, China.ORCID 0000-0001-8757-4602
Qingya Shen *Department of Biophysics, and Department of Pathology of Sir Run Run Shaw Hospital, Zhejiang University School of Medicine, Hangzhou 310058, China.ORCID 0000-0001-6602-7116
Haixia Su *The CAS Key Laboratory of Receptor Research, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai 201203, China.ORCID 0000-0002-7174-3851
Xiaoxi WangThe CAS Key Laboratory of Receptor Research, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai 201203, China.ORCID 0000-0002-4274-5698
Fulai ZhouThe CAS Key Laboratory of Receptor Research, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai 201203, China.ORCID 0000-0002-3840-6757
Wenfeng ZhaoThe CAS Key Laboratory of Receptor Research, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai 201203, China.ORCID 0000-0003-2517-4747
Minqi GaoWuxiBiortus Biosciences Co. Ltd., Jiangyin 214437, China.ORCID 0000-0003-1082-4380
Shenghai ChangCenter of Cryo-Electron Microscopy, Zhejiang University School of Medicine, Hangzhou 310058, China.ORCID 0000-0002-0908-711X
Yuan-Chao XieThe CAS Key Laboratory of Receptor Research, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai 201203, China.ORCID 0000-0001-9875-887X
Guanghui TianThe CAS Key Laboratory of Receptor Research, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai 201203, China.ORCID 0000-0002-7988-5715
He-Wei JiangShanghai Center for Systems Biomedicine, Key Laboratory of Systems Biomedicine (Ministry of Education), Shanghai Jiao Tong University, Shanghai 200240, China.
Sheng-Ce TaoShanghai Center for Systems Biomedicine, Key Laboratory of Systems Biomedicine (Ministry of Education), Shanghai Jiao Tong University, Shanghai 200240, China.ORCID 0000-0002-9210-1823
Jingshan ShenThe CAS Key Laboratory of Receptor Research, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai 201203, China.ORCID 0000-0001-9679-9934
Yi JiangThe CAS Key Laboratory of Receptor Research, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai 201203, China.ORCID 0000-0002-0723-1413
Hualiang JiangThe CAS Key Laboratory of Receptor Research, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai 201203, China.ORCID 0000-0003-0656-6315
Yechun XuThe CAS Key Laboratory of Receptor Research, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai 201203, China. eric.xu@simm.ac.cn zhang_yan@zju.edu.cn shuyangzhang103@nrdrs.org ycxu@simm.ac.cn.ORCID 0000-0002-3120-3578
Shuyang ZhangDepartment of Cardiology, Peking Union Medical College Hospital, Peking Union Medical College and Chinese Academy of Medical Sciences, Beijing 100730, China. eric.xu@simm.ac.cn zhang_yan@zju.edu.cn shuyangzhang103@nrdrs.org ycxu@simm.ac.cn.ORCID 0000-0002-1532-0029
Yan ZhangDepartment of Biophysics, and Department of Pathology of Sir Run Run Shaw Hospital, Zhejiang University School of Medicine, Hangzhou 310058, China. eric.xu@simm.ac.cn zhang_yan@zju.edu.cn shuyangzhang103@nrdrs.org ycxu@simm.ac.cn.ORCID 0000-0003-2189-0244
H Eric XuThe CAS Key Laboratory of Receptor Research, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai 201203, China. eric.xu@simm.ac.cn zhang_yan@zju.edu.cn shuyangzhang103@nrdrs.org ycxu@simm.ac.cn.ORCID 0000-0002-6829-8144
Chinese Academy of Sciences · CNSir Run Run Shaw Hospital · CNShanghai Jiao Tong University · CNChinese Academy of Medical Sciences & Peking Union Medical College · CNBiortus (China) · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The pandemic of coronavirus disease 2019 (COVID-19), caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), has become a global crisis. Replication of SARS-CoV-2 requires the viral RNA-dependent RNA polymerase (RdRp) enzyme, a target of the antiviral drug remdesivir. Here we report the cryo-electron microscopy structure of the SARS-CoV-2 RdRp, both in the apo form at 2.8-angstrom resolution and in complex with a 50-base template-primer RNA and remdesivir at 2.5-angstrom resolution. The complex structure reveals that the partial double-stranded RNA template is inserted into the central channel of the RdRp, where remdesivir is covalently incorporated into the primer strand at the first replicated base pair, and terminates chain elongation. Our structures provide insights into the mechanism of viral RNA replication and a rational template for drug design to combat the viral infection.

Indexed as

Adenosine MonophosphateAlanineAntiviral AgentsBetacoronavirusCatalytic DomainCoronavirus RNA-Dependent RNA PolymeraseCryoelectron MicroscopyEnzyme InhibitorsModels, MolecularMultiprotein ComplexesProtein ConformationRNA-Dependent RNA PolymeraseRNA, ViralSARS-CoV-2Viral Nonstructural ProteinsVirus ReplicationAdenosine MonophosphateAlanineAntiviral AgentsCoronavirus RNA-Dependent RNA PolymeraseEnzyme InhibitorsMultiprotein ComplexesNS8 protein, SARS-CoV-2NSP12 protein, SARS-CoV-2ORF1ab polyprotein, SARS-CoV-2remdesivirRNA-Dependent RNA PolymeraseRNA, ViralViral Nonstructural Proteins

Identifiers

PMID32358203
PMCPMC7199908
OpenAlexW3022734398

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.