Evidence map›Paper›PMID 32358068›Full record

ArticleThe Journal of biological chemistry2020

CRISPR-addressable yeast strains with applications in human G protein-coupled receptor profiling and synthetic biology.

Jacob B Rowe, Geoffrey J Taghon, Nicholas J Kapolka, William M Morgan, Daniel G Isom

Abstract read
In one paragraph

Article in The Journal of biological chemistry, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Review
  6. Review
  7. Review
  8. Article
  9. Article
  10. Proton-gated coincidence detection is a common feature of GPCR signaling.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  11. Article
  12. The evolution and mechanism of GPCR proton sensing.The Journal of biological chemistry
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Jacob B RoweDepartment of Molecular and Cellular Pharmacology, University of Miami Miller School of Medicine, Miami, Florida, USA.ORCID 0000-0001-7147-5407
Geoffrey J TaghonDepartment of Molecular and Cellular Pharmacology, University of Miami Miller School of Medicine, Miami, Florida, USA.
Nicholas J KapolkaDepartment of Molecular and Cellular Pharmacology, University of Miami Miller School of Medicine, Miami, Florida, USA.
William M MorganDepartment of Molecular and Cellular Pharmacology, University of Miami Miller School of Medicine, Miami, Florida, USA.
Daniel G IsomDepartment of Molecular and Cellular Pharmacology, University of Miami Miller School of Medicine, Miami, Florida, USA disom@miami.edu.

Funding

pH regulation of cell surface receptorsR35GM119518 · NIGMS · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI Daniel Isom · 2016 to 2026
$4.1M
New CRISPR-based technologies for screening dark GPCRsR03TR002908 · NCATS · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI ISOM, DANIEL · 2019 to 2019
$154k
NCATS NIH HHS R03 TR002908NIGMS NIH HHS R35 GM119518
6 · The paper itself

Abstract

Genome stability is essential for engineering cell-based devices and reporter systems. With the advent of CRISPR technology, it is now possible to build such systems by installing the necessary genetic parts directly into an organism's genome. Here, we used this approach to build a set of 10 versatile yeast-based reporter strains for studying human G protein-coupled receptors (GPCRs), the largest class of membrane receptors in humans. These reporter strains contain the necessary genetically encoded parts for studying human GPCR signaling in yeast, as well as four CRISPR-addressable expression cassettes,

Indexed as

Synthetic BiologyAutocrine CommunicationClustered Regularly Interspaced Short Palindromic RepeatsGene DosageGenes, ReporterHumansMetabolic EngineeringPheromonesReceptors, G-Protein-CoupledReceptors, Mating FactorReceptors, SomatostatinReproducibility of ResultsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSignal TransductionSomatostatinGPR68 protein, humanPheromonesReceptors, G-Protein-CoupledReceptors, Mating FactorReceptors, SomatostatinSaccharomyces cerevisiae ProteinsSomatostatinsomatostatin receptor 5somatostatin, Trp(8)-STE2 protein, S cerevisiaebioengineeringCRISPR/CasDNA payloadsgenome barcodingG protein–coupled receptor (GPCR)landing padpathway engineeringSaccharomyces cerevisiaesafe harbor locussynthetic biology

Identifiers

PMID32358068
PMCPMC7294089

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.