Evidence map›Paper›PMID 32357837›Full record

ArticleBMC plant biology2020

Fine mapping of the major anthracnose resistance QTL AnR

Yuanyuan Zhao, Yiwei Liu, Zhenghai Zhang, Yacong Cao, Hailong Yu, Wenwen Ma, Baoxi Zhang, Risheng Wang, Jie Gao, Lihao Wang

Open access · goldAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in BMC plant biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.6field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 19 citations in OpenAlex.

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  6. Development and application of KASP markers associated withPhysiology and molecular biology of plants : an international journal of functional plant biology · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 1 country.

Yuanyuan ZhaoKey Laboratory of Vegetable Genetics and Physiology of the China Ministry of Agriculture, Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, No 12 Zhongguancun South Street, Beijing, 100081, People's Republic of China.
Yiwei LiuKey Laboratory of Vegetable Genetics and Physiology of the China Ministry of Agriculture, Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, No 12 Zhongguancun South Street, Beijing, 100081, People's Republic of China.
Zhenghai ZhangKey Laboratory of Vegetable Genetics and Physiology of the China Ministry of Agriculture, Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, No 12 Zhongguancun South Street, Beijing, 100081, People's Republic of China.
Yacong CaoKey Laboratory of Vegetable Genetics and Physiology of the China Ministry of Agriculture, Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, No 12 Zhongguancun South Street, Beijing, 100081, People's Republic of China.
Hailong YuKey Laboratory of Vegetable Genetics and Physiology of the China Ministry of Agriculture, Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, No 12 Zhongguancun South Street, Beijing, 100081, People's Republic of China.
Wenwen MaKey Laboratory of Vegetable Genetics and Physiology of the China Ministry of Agriculture, Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, No 12 Zhongguancun South Street, Beijing, 100081, People's Republic of China.
Baoxi ZhangKey Laboratory of Vegetable Genetics and Physiology of the China Ministry of Agriculture, Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, No 12 Zhongguancun South Street, Beijing, 100081, People's Republic of China.
Risheng WangVegetable Research Institute, Guangxi Academy of Agricultural Sciences, No 174, East University Road, Nanning, Guangxi, 530007, People's Republic of China.
Jie GaoCollege of Forestry and Horticulture, Xinjiang Agricultural University, 467 Xinjiang, Urumqi, 830052, People's Republic of China. 2905913615@qq.com.
Lihao WangKey Laboratory of Vegetable Genetics and Physiology of the China Ministry of Agriculture, Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, No 12 Zhongguancun South Street, Beijing, 100081, People's Republic of China. wanglihao@caas.cn.
Institute of Vegetables and Flowers · CNChinese Academy of Agricultural Sciences · CNXinjiang Agricultural University · CNGuangxi Academy of Agricultural Science · CN

Funding

Guangxi science and technology project GUIKEAB16380065Key Technologies Research and Development Program (CN) 2017YFD01019001National Natural Science Foundation of China 31572121Project of China Ministry of Agriculture CARS-25The Collaboration Science and Technology Innovation Program of the Chinese Academy of Agricultural Sciences CAAS-ASTIP-IVFCAAS
6 · The paper itself

Abstract

backgroundColletotrichum species are the causal agents of anthracnose, a major disease affecting the yield and quality of pepper (Capsicum spp.). Colletotrichum scovillei is widespread in China, has strong pathogenicity and drug resistance, and causes anthracnose disease in pepper fruits that severely reduces production. Previously, an anti-anthracnose locus AnR

resultsOn the basis of results of re-sequencing of Capsicum chinense 'PBC932' and C. annuum '77013', we developed Kompetitive allele-specific PCR (KASPar) markers and insertion-deletion (InDel) markers linked to AnR

conclusionsWe narrowed down the QTL interval to a region containing five genes. These results will be useful for further research on the mechanisms of resistance to anthracnose, and for marker assisted selection for anthracnose-resistant capsicum lines.

Indexed as

Chromosome MappingChromosomes, PlantColletotrichumGenes, PlantCapsicumDisease ResistancePhenotypePlant DiseasesQuantitative Trait LociTranscriptomeAnthracnoseColletotrichum scovilleiFine mappingPepperQTL

Identifiers

PMID32357837
PMCPMC7195712
OpenAlexW3023700961

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.