Evidence map›Paper›PMID 32356724›Full record

ArticleeLife2020

A big-data approach to understanding metabolic rate and response to obesity in laboratory mice.

June K Corrigan, Deepti Ramachandran, Yuchen He, Colin J Palmer, Michael J Jurczak, Rui Chen, Bingshan Li, Randall H Friedline, Jason K Kim, Jon J Ramsey and 4 more

Open access · goldAbstract read
In one paragraph

Article in eLife, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 49 papers.

0numbers the graph read from it
0cells of the map it votes in
49citing papers in PubMed
6.9field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

49 citing papers in PubMed, 80 citations in OpenAlex.

  1. Article
  2. Article
  3. Comparative analysis of naked mole-rat thermogenesis and its potential to maintain euthermia in response to cold.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  4. Article
  5. On the replicability of physiological responses.The Journal of experimental biology · 2026
    Article
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  7. Review
  8. Establishment of cell size-dependent growth rate via differential scaling of metabolite uptake and release.Proceedings of the National Academy of Sciences of the United States of America · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 5 institutions in 1 country.

June K CorriganDivision of Endocrinology, Diabetes and Metabolism, Beth Israel Deaconess Medical Center and Harvard Medical School, Boston, United States.ORCID 0000-0002-7514-0177
Deepti RamachandranDivision of Endocrinology, Diabetes and Metabolism, Beth Israel Deaconess Medical Center and Harvard Medical School, Boston, United States.ORCID 0000-0003-1113-1295
Yuchen HeDivision of Endocrinology, Diabetes and Metabolism, Beth Israel Deaconess Medical Center and Harvard Medical School, Boston, United States.
Colin J PalmerDivision of Endocrinology, Diabetes and Metabolism, Beth Israel Deaconess Medical Center and Harvard Medical School, Boston, United States.
Michael J JurczakDivision of Endocrinology, Yale University School of Medicine, New Haven, United States.
Rui ChenDepartment of Molecular Physiology and Biophysics, Vanderbilt University School of Medicine, Nashville, United States.
Bingshan LiDepartment of Molecular Physiology and Biophysics, Vanderbilt University School of Medicine, Nashville, United States.
Randall H FriedlineProgram in Molecular Medicine, University of Massachusetts Medical School, Worcester, United States.
Jason K KimProgram in Molecular Medicine, University of Massachusetts Medical School, Worcester, United States.
Jon J RamseyDepartment of Molecular Biosciences, School of Veterinary Medicine, University of California, Davis, Davis, United States.
Louise LantierDepartment of Molecular Physiology and Biophysics, Vanderbilt University School of Medicine, Nashville, United States.ORCID 0000-0002-6620-4976
Owen P McGuinnessDepartment of Molecular Physiology and Biophysics, Vanderbilt University School of Medicine, Nashville, United States.ORCID 0000-0002-1778-3203
Mouse Metabolic Phenotyping Center Energy Balance Working Group
Alexander S BanksDivision of Endocrinology, Diabetes and Metabolism, Beth Israel Deaconess Medical Center and Harvard Medical School, Boston, United States.ORCID 0000-0003-1787-6925
Beth Israel Deaconess Medical Center · USVanderbilt University · USUniversity of Massachusetts Chan Medical School · USUniversity of California, Davis · USUniversity of Pittsburgh · US

Funding

Coordinating and Bioinformatics Unit for the MMPC/DiaCompU24DK076169 · NIDDK · AUGUSTA UNIVERSITY · PI MCINDOE, RICHARD A. · 2006 to 2018
$42.4M
STRUCTURE-FUNCTION RELATIONSHIPS IN THE ALIMENTARY TRACTP30DK034854 · NIDDK · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI JONATHAN C KAGAN · 1986 to 2026
$32.4M
TRANSGENIC MOUSE/ ES CELL SHARES RESOURCESP60DK020593 · NIDDK · VANDERBILT UNIVERSITY · PI ELASY, TOM A · 1986 to 2011
$28.1M
Transgenic CoreP30DK046200 · NIDDK · TUFTS MEDICAL CENTER · PI HU, FRANK B · 1992 to 2021
$25.0M
Vanderbilt Mouse Metabolic Physiology CenterU24DK059637 · NIDDK · VANDERBILT UNIVERSITY · PI WASSERMAN, DAVID H · 2001 to 2015
$14.9M
LIPID, LIPOPROTEIN, AND GLUCOSE METABOLISM COREU24DK059630 · NIDDK · UNIVERSITY OF CINCINNATI · PI TSO, PATRICK · 2001 to 2015
$12.9M
Yale Mouse Metabolic Phenotyping CenterU24DK059635 · NIDDK · YALE UNIVERSITY · PI SHULMAN, GERALD I · 2001 to 2015
$8.9M
Mouse Metabolic Phenotyping Center (MMPC) at UC DavisU2CDK092993 · NIDDK · UNIVERSITY OF CALIFORNIA AT DAVIS · PI LLOYD, KC KENT · 2016 to 2021
$5.9M
UMass Mouse Metabolic Phenotyping Center - Metabolism CoreU2CDK093000 · NIDDK · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI KIM, JASON K · 2016 to 2021
$4.6M
Mouse Metabolic Phenotyping Center (MMPC) at UC DavisU24DK092993 · NIDDK · UNIVERSITY OF CALIFORNIA AT DAVIS · PI LLOYD, KC KENT · 2011 to 2015
$4.1M
Mechanism of Gdf3 action to limit insulin sensitivity in obesityR01DK107717 · NIDDK · BRIGHAM AND WOMEN'S HOSPITAL · PI BANKS, ALEXANDER · 2016 to 2023
$3.8M
Mouse Metabolic Phenotyping CenterU24DK076174 · NIDDK · CASE WESTERN RESERVE UNIVERSITY · PI BRUNENGRABER, HENRI · 2011 to 2015
$2.7M
British Heart Foundation PG/18/56/33935NIDDK NIH HHS P30 DK034854NIDDK NIH HHS P30 DK046200NIDDK NIH HHS P60 DK020593NIDDK NIH HHS R01 DK107717NIDDK NIH HHS U24 DK059630NIDDK NIH HHS U24 DK059635NIDDK NIH HHS U24 DK059637NIDDK NIH HHS U24 DK076169NIDDK NIH HHS U24 DK076174NIDDK NIH HHS U24 DK092993NIDDK NIH HHS U24 DK093000NIDDK NIH HHS U2C DK092993NIDDK NIH HHS U2C DK093000NIH HHS S10 OD028635
6 · The paper itself

Abstract

Maintaining a healthy body weight requires an exquisite balance between energy intake and energy expenditure. To understand the genetic and environmental factors that contribute to the regulation of body weight, an important first step is to establish the normal range of metabolic values and primary sources contributing to variability. Energy metabolism is measured by powerful and sensitive indirect calorimetry devices. Analysis of nearly 10,000 wild-type mice from two large-scale experiments revealed that the largest variation in energy expenditure is due to body composition, ambient temperature, and institutional site of experimentation. We also analyze variation in 2329 knockout strains and establish a reference for the magnitude of metabolic changes. Based on these findings, we provide suggestions for how best to design and conduct energy balance experiments in rodents. These recommendations will move us closer to the goal of a centralized physiological repository to foster transparency, rigor and reproducibility in metabolic physiology experimentation.

Indexed as

AdiposityBig DataEnergy MetabolismAnimal FeedAnimal HusbandryAnimalsCalorimetry, IndirectDisease Models, AnimalFemaleGenotypeMaleMice, Inbred C57BLMice, KnockoutObesityPhenotypeTemperatureenergy expenditurefood intakegeneticshuman biologymedicinemetabolic ratemouseneuroscienceobesitythermogenesis

Identifiers

PMID32356724
PMCPMC7274785
OpenAlexW3020864146

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.