Evidence map›Paper›PMID 32356273›Full record

ArticleThe protein journal2020

Defense Response in Chickpea Pod Wall due to Simulated Herbivory Unfolds Differential Proteome Profile.

Mamta Bhattacharjee, Santanu Dhar, Pratap Jyoti Handique, Sumita Acharjee, Bidyut Kumar Sarmah

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Article in The protein journal, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.7field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 6 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Mamta BhattacharjeeDepartment of Agricultural Biotechnology, Assam Agricultural University, Jorhat, 785013, India.
Santanu DharDepartment of Agricultural Biotechnology, Assam Agricultural University, Jorhat, 785013, India.
Pratap Jyoti HandiqueDepartment of Biotechnology, Gauhati University, Guwahati, 781014, India.
Sumita AcharjeeDepartment of Agricultural Biotechnology, Assam Agricultural University, Jorhat, 785013, India. sumita.aus@gmail.com.ORCID 0000-0002-9806-0655
Bidyut Kumar SarmahDepartment of Agricultural Biotechnology, Assam Agricultural University, Jorhat, 785013, India. bidyutsarmah@aau.ac.in.
Assam Agricultural University · INGauhati University · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The pod wall of legumes is known to protect the developing seeds from pests and pathogens. However, the mechanism of conferring defense against insects has not yet been deciphered. Here, we have utilized 2-dimensional gel electrophoresis (2D-GE) coupled with mass spectrometry (MS/MS) to identify over expressed proteins in the pod wall of two different cultivars (commercial cultivar: JG 11 and tolerant cultivar: ICC 506-EB) of chickpea after 12 h of application of Helicoverpa armigera oral secretions (simulated herbivory). The assays were performed with a view that larvae are a voracious feeder and cause substantial damage to the pod within 12 h. A total of 600 reproducible protein spots were detected on gels, and the comparative analysis helped identify 35 (12 up-regulated, 23 down-regulated) and 20 (10 up-regulated, 10 down-regulated) differentially expressed proteins in JG 11 and ICC 506-EB, respectively. Functional classification of protein spots of each cultivar after MS/MS indicated that the differentially expressed proteins were associated with various metabolic activities. Also, stress-related proteins such as mannitol dehydrogenase (MADH), disease resistance-like protein-CSA1, serine/threonine kinase (D6PKL2), endoglucanase-19 etc. were up-regulated due to simulated herbivory. The proteins identified with a possible role in defense were further analyzed using the STRING database to advance our knowledge on their interacting partners. It decoded the involvement of several reactive oxygen species (ROS) scavengers and other proteins involved in cell wall reinforcement. The biochemical analysis also confirmed the active role of ROS scavengers during simulated herbivory. Thus, our study provides valuable new insights on chickpea-H.armigera interactions at the protein level.

Indexed as

AnimalsCellulaseCell WallCicerFree Radical ScavengersFruitGene Expression Regulation, PlantGene OntologyHerbivoryHost-Parasite InteractionsLarvaLepidopteraMannitol DehydrogenasesMolecular Sequence AnnotationPlant LectinsPlant ProteinsCellulaseCytisus-type anti-H(O) lectinsFree Radical ScavengersMannitol DehydrogenasesPlant LectinsPlant ProteinsProtein Kinases2D-GEChickpeaHelicoverpa armigeraMS/MSSTRING

Identifiers

PMID32356273
OpenAlexW3022595198

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.