Evidence map›Paper›PMID 32354835›Full record

ArticleGenes & development2020

Molecular structures and mechanisms of DNA break processing in mouse meiosis.

Shintaro Yamada, Anjali Gupta Hinch, Hisashi Kamido, Yongwei Zhang, Winfried Edelmann, Scott Keeney

Open access · diamondAbstract read
In one paragraph

Article in Genes & development, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 49 papers.

0numbers the graph read from it
0cells of the map it votes in
49citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

49 citing papers in PubMed, 74 citations in OpenAlex.

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  13. Cryo-EM structures of the Spo11 core complex bound to DNA.Nature structural & molecular biology · 2025
    Article
  14. Review
  15. Reconstitution of SPO11-dependent double-strand break formation.bioRxiv : the preprint server for biology · 2024
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 3 countries.

Shintaro YamadaMolecular Biology Program, Memorial Sloan Kettering Cancer Center, New York, New York 10065, USA.
Anjali Gupta HinchWellcome Centre for Human Genetics, University of Oxford, Oxford OX3 7BN, United Kingdom.
Hisashi KamidoMolecular Biology Program, Memorial Sloan Kettering Cancer Center, New York, New York 10065, USA.
Yongwei ZhangDepartment of Cell Biology and Department of Genetics, Albert Einstein College of Medicine, Bronx, New York 10461, USA.
Winfried EdelmannDepartment of Cell Biology and Department of Genetics, Albert Einstein College of Medicine, Bronx, New York 10461, USA.
Scott KeeneyMolecular Biology Program, Memorial Sloan Kettering Cancer Center, New York, New York 10065, USA.ORCID 0000-0002-1283-6417
Memorial Sloan Kettering Cancer Center · USAlbert Einstein College of Medicine · USCentre for Human Genetics · GB

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Nicholas D Socci · 1985 to 2026
$347.4M
Mechanism and regulation of meiotic recombinationR35GM118092 · NIGMS · SLOAN-KETTERING INST CAN RESEARCH · PI Scott Keeney · 2016 to 2026
$7.0M
NCI NIH HHS P30 CA008748NIGMS NIH HHS R35 GM118092
6 · The paper itself

Abstract

Exonucleolytic resection, critical to repair double-strand breaks (DSBs) by recombination, is not well understood, particularly in mammalian meiosis. Here, we define structures of resected DSBs in mouse spermatocytes genome-wide at nucleotide resolution. Resection tracts averaged 1100 nt, but with substantial fine-scale heterogeneity at individual hot spots. Surprisingly, EXO1 is not the major 5' → 3' exonuclease, but the DSB-responsive kinase ATM proved a key regulator of both initiation and extension of resection. In wild type, apparent intermolecular recombination intermediates clustered near to but offset from DSB positions, consistent with joint molecules with incompletely invaded 3' ends. Finally, we provide evidence for PRDM9-dependent chromatin remodeling leading to increased accessibility at recombination sites. Our findings give insight into the mechanisms of DSB processing and repair in meiotic chromatin.

Indexed as

MeiosisAnimalsChromatinDNADNA Breaks, Double-StrandedDNA RepairHistone-Lysine N-MethyltransferaseMiceMolecular StructureRecombination, GeneticChromatinDNAHistone-Lysine N-Methyltransferaseprdm9 protein, mouseATMchromatinDNA double-strand breaksEXO1meiosisPRDM9recombinationresection

Identifiers

PMID32354835
PMCPMC7263140
OpenAlexW3022980205

What OpenQuestion holds

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LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.