Evidence map›Paper›PMID 32354127›Full record

ArticleInternational journal of molecular sciences2020

Structural Analysis of Jumbo Coliphage phAPEC6.

Jeroen Wagemans, Jessica Tsonos, Dominique Holtappels, Kiandro Fortuna, Jean-Pierre Hernalsteens, Henri De Greve, Leandro F Estrozi, Maria Bacia-Verloop, Christine Moriscot, Jean-Paul Noben and 2 more

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Characterization and Comparative Genomic Analysis of Three VirulentInternational journal of molecular sciences · 2023
    Article
  6. Article
  7. NovelPharmaceutics · 2022
    Article
  8. Characterization and Genomic Analysis of a New Phage InfectingInternational journal of molecular sciences · 2022
    Article
  9. Article
  10. Article
  11. NovelMicroorganisms · 2022
    Article
  12. Review
  13. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 2 countries.

Jeroen WagemansDepartment of Biosystems, KU Leuven, Kasteelpark Arenberg 21 - box 2462, 3001 Leuven, Belgium.
Jessica TsonosDepartment of Biosystems, KU Leuven, Kasteelpark Arenberg 21 - box 2462, 3001 Leuven, Belgium.
Dominique HoltappelsDepartment of Biosystems, KU Leuven, Kasteelpark Arenberg 21 - box 2462, 3001 Leuven, Belgium.
Kiandro FortunaDepartment of Biosystems, KU Leuven, Kasteelpark Arenberg 21 - box 2462, 3001 Leuven, Belgium.
Jean-Pierre HernalsteensDepartment of Biology, Vrije Universiteit Brussel, Pleinlaan 2, 1050 Brussel, Belgium.
Henri De GreveStructural Biology Brussels, Vrije Universiteit Brussel, Pleinlaan 2, 1050 Brussels, Belgium.
Leandro F EstroziUniv. Grenoble Alpes, CEA, CNRS, IBS, F-38000 Grenoble, France.
Maria Bacia-VerloopUniv. Grenoble Alpes, CEA, CNRS, IBS, F-38000 Grenoble, France.
Christine MoriscotUniv. Grenoble Alpes, CNRS, CEA, EMBL, Integrated Structural Biology Grenoble (ISBG), F-38042 Grenoble, France.
Jean-Paul NobenBiomedical Research Institute and Transnational University Limburg, Hasselt University, Agoralaan D, 3590 Hasselt, Belgium.
Guy SchoehnUniv. Grenoble Alpes, CEA, CNRS, IBS, F-38000 Grenoble, France.
Rob LavigneDepartment of Biosystems, KU Leuven, Kasteelpark Arenberg 21 - box 2462, 3001 Leuven, Belgium.
Centre National de la Recherche Scientifique · FRKU Leuven · BEVrije Universiteit Brussel · BETransnational University Limburg · BE

Funding

FPS Health, Food Chain Safety & Environment (Belgium) RT 09/8 APECONFrench Infrastructure for Integrated Structural Biology ANR-10-INBS-02-02FWO (ERA-net ANIWHA) G0D5915NUniversity Grenoble Alpes graduate school ANR-17-EURE-0003
6 · The paper itself

Abstract

The phAPEC6 genome encodes 551 predicted gene products, with the vast majority (83%) of unknown function. Of these, 62 have been identified as virion-associated proteins by mass spectrometry (ESI-MS/MS), including the major capsid protein (Gp225; present in 1620 copies), which shows a HK97 capsid protein-based fold. Cryo-electron microscopy experiments showed that the 350-kbp DNA molecule of

Indexed as

ColiphagesCryoelectron MicroscopyGenome SizeMolecular StructureTandem Mass SpectrometryViral Genome PackagingViral ProteinsVirionViral Proteinscryo-EMHK97-foldjumbo phage

Identifiers

PMID32354127
PMCPMC7247149
OpenAlexW3023337474

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.