Evidence map›Paper›PMID 32351617›Full record

ArticleChinese medicine2020

LC-MS-based multivariate statistical analysis for the screening of potential thrombin/factor Xa inhibitors from Radix Salvia Miltiorrhiza.

Yi-Yao Yang, Zhao-Yu Wu, Hao Zhang, Shi-Jun Yin, Fang-Bo Xia, Qian Zhang, Jian-Bo Wan, Jian-Li Gao, Feng-Qing Yang

Open access · goldAbstract read
In one paragraph

Article in Chinese medicine, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
4.5field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 26 citations in OpenAlex.

  1. Article
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  3. Review
  4. Effects ofFrontiers in cell and developmental biology · 2023
    Review
  5. Flavonol and A-type procyanidin-rich extracts ofFrontiers in pharmacology · 2023
    Article
  6. Article
  7. Article
  8. Characterization ofMolecules (Basel, Switzerland) · 2020
    Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Yi-Yao Yang1School of Chemistry and Chemical Engineering, Chongqing University, Chongqing, 401331 People's Republic of China.
Zhao-Yu Wu1School of Chemistry and Chemical Engineering, Chongqing University, Chongqing, 401331 People's Republic of China.
Hao Zhang1School of Chemistry and Chemical Engineering, Chongqing University, Chongqing, 401331 People's Republic of China.
Shi-Jun Yin1School of Chemistry and Chemical Engineering, Chongqing University, Chongqing, 401331 People's Republic of China.
Fang-Bo Xia3State Key Laboratory of Quality Research in Chinese Medicine, Institute of Chinese Medical Sciences, University of Macau, Macao, People's Republic of China.
Qian Zhang1School of Chemistry and Chemical Engineering, Chongqing University, Chongqing, 401331 People's Republic of China.
Jian-Bo Wan3State Key Laboratory of Quality Research in Chinese Medicine, Institute of Chinese Medical Sciences, University of Macau, Macao, People's Republic of China.
Jian-Li Gao2Academy of Chinese Medical Sciences, Zhejiang Chinese Medical University, Hangzhou, Zhejiang 310053 People's Republic of China.
Feng-Qing Yang1School of Chemistry and Chemical Engineering, Chongqing University, Chongqing, 401331 People's Republic of China.ORCID 0000-0002-9300-5710
Chongqing University · CNUniversity of Macau · MOZhejiang Chinese Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe dry root and rhizome of

methodsFour extracts [butanol (BA), ethyl acetate (EA) and remained extract (RE) from 75% ethanol extract, and water extract (WE)] of Danshen were prepared, and their THR/FXa inhibitory activities were assessed in vitro. Then, the active EA extract was further separated by silica-gel column chromatography (SC), and its fractions (SC1-SC5) were analyzed by LC-MS. The principal component analysis (PCA) and orthogonal partial least squares discriminate analysis (OPLS-DA) were employed for predicting the specific marker compounds. The chemical structures of targeted compounds were identified by LC-MS/MS and their interactions with THR/FXa were analyzed by the molecular docking analysis.

resultsDanshen EA extract showed strong activity against THR and FXa, and its fractions (SC1-SC5) exhibited obvious difference in inhibitory activity against these two enzymes. Furthermore, four marker compounds with potential THR/FXa inhibitory activity were screened by PCA and OPLS-DA, and were identified as cryptotanshinone, tanshinone I, dihydrotanshinone I and tanshinone IIA. The molecular docking study showed that all these four tanshinones can interact with some key amino acid residues of the THR/FXa active cavities, such as HIS57 and SER195, which were considered to be promising candidates targeting THR and/or FXa with low binding energy (< - 7 kcal mol

conclusionsLC-MS combined with multivariate statistical analysis can effectively screen potential THR/FXa inhibitory components in Danshen.

Indexed as

Factor XaInhibitor screeningMolecular dockingMultivariate statistical analysisRadix Salvia MiltiorrhizaThrombin

Identifiers

PMID32351617
PMCPMC7183602
OpenAlexW3021107220

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.