Evidence map›Paper›PMID 32351476›Full record

ArticleFrontiers in microbiology2020

Pathogenomes of Atypical Non-shigatoxigenic

Emmanuel C Nyong, Sam R Zaia, Anna Allué-Guardia, Armando L Rodriguez, Zaina Irion-Byrd, Sara S K Koenig, Peter Feng, James L Bono, Mark Eppinger

Open access · goldAbstract read
In one paragraph

Article in Frontiers in microbiology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.7field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Frontiers in microbiology · 2023
    Article
  7. Genomic Analysis of a Hybrid Enteroaggregative HemorrhagicAntibiotics (Basel, Switzerland) · 2022
    Article
  8. Comparative Genomics ofMicroorganisms · 2022
    Article
  9. Article
  10. Article
  11. Genome Sequence Analysis and Characterization of Shiga Toxin 2 Production byFrontiers in cellular and infection microbiology · 2022
    Article
  12. Comparative Whole Genome Analysis ofFrontiers in microbiology · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Emmanuel C NyongDepartment of Biology, The University of Texas at San Antonio, San Antonio, TX, United States.
Sam R ZaiaDepartment of Biology, The University of Texas at San Antonio, San Antonio, TX, United States.
Anna Allué-GuardiaDepartment of Biology, The University of Texas at San Antonio, San Antonio, TX, United States.
Armando L RodriguezResearch Computing Support Group, The University of Texas at San Antonio, San Antonio, TX, United States.
Zaina Irion-ByrdDepartment of Biology, The University of Texas at San Antonio, San Antonio, TX, United States.
Sara S K KoenigDepartment of Biology, The University of Texas at San Antonio, San Antonio, TX, United States.
Peter FengRetired, Rockville, MD, United States.
James L BonoUnited States Meat Animal Research Center, Agricultural Research Service, United States Department of Agriculture (ARS-USDA), Clay Center, NE, United States.
Mark EppingerDepartment of Biology, The University of Texas at San Antonio, San Antonio, TX, United States.
The University of Texas at San Antonio · USTexas Center for Infectious Disease · USRoman L. Hruska U.S. Meat Animal Research Center · US

Funding

Phylogenomic framework for virulence studies of Escherichia coli O157:H7SC2AI120941 · NIAID · UNIVERSITY OF TEXAS SAN ANTONIO · PI EPPINGER, MARK · 2015 to 2017
$441k
NIAID NIH HHS SC2 AI120941
6 · The paper itself

Abstract

The toxigenic conversion of

Indexed as

comparative phylogenomicsenterohemorrhagic E. coli (EHEC)LRT (long read technology)NSF O157:H7SF O157:NMShiga toxin (Stx) producing Escherichia coli (STEC)SRT (short read technology)whole genome sequencing and typing (WGST)

Identifiers

PMID32351476
PMCPMC7175801
OpenAlexW3016297703

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.