Evidence map›Paper›PMID 32350076›Full record

Trial reportJournal of virology2020

Delayed Expression of PD-1 and TIGIT on HIV-Specific CD8 T Cells in Untreated HLA-B*57:01 Individuals Followed from Early Infection.

Lydia Scharf, Johanna Tauriainen, Marcus Buggert, Wendy Hartogensis, David J Nolan, Steven G Deeks, Marco Salemi, Frederick M Hecht, Annika C Karlsson

Open access · hybridAbstract readClinical TrialMulticenter Study
In one paragraph

Trial report in Journal of virology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.8field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 8 citations in OpenAlex.

  1. Review
  2. New insight in immunotherapy and combine therapy in colorectal cancer.Frontiers in cell and developmental biology · 2024
    Review
  3. Can Soluble Immune Checkpoint Molecules on Exosomes Mediate Inflammation?Journal of neuroimmune pharmacology : the official journal of the Society on NeuroImmune Pharmacology · 2022
    Review
  4. Article
  5. The CD8Microbiology and molecular biology reviews : MMBR · 2021
    Review
  6. Article
  7. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Lydia ScharfDepartment of Laboratory Medicine, Karolinska Institutet, Stockholm, Sweden.ORCID 0000-0002-1596-2208
Johanna TauriainenDepartment of Laboratory Medicine, Karolinska Institutet, Stockholm, Sweden.
Marcus BuggertDepartment of Medicine, Karolinska Institutet, Stockholm, Sweden.
Wendy HartogensisDepartment of Medicine, University of California, San Francisco, San Francisco, California, USA.
David J NolanDepartment of Pathology, Immunology and Laboratory Medicine, University of Florida, Gainesville, Florida, USA.
Steven G DeeksDepartment of Medicine, University of California, San Francisco, San Francisco, California, USA.
Marco SalemiDepartment of Pathology, Immunology and Laboratory Medicine, University of Florida, Gainesville, Florida, USA.
Frederick M HechtDepartment of Medicine, University of California, San Francisco, San Francisco, California, USA.
Annika C KarlssonDepartment of Laboratory Medicine, Karolinska Institutet, Stockholm, Sweden annika.karlsson@ki.se.ORCID 0000-0002-2028-8393
Karolinska Institutet · SEUniversity of California, San Francisco · USUniversity of Florida · US

Funding

Virology CoreP30AI027763 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI MALLORY O JOHNSON · 1988 to 2026
$93.6M
Transmission and Persistence of CTL and Drug Resistance MutationsP01AI071713 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI HECHT, FREDERICK M · 2007 to 2011
$14.3M
Mentoring and Research in Integrative MedicineK24AT007827 · NCCIH · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI HECHT, FREDERICK M · 2013 to 2022
$1.8M
NCCIH NIH HHS K24 AT007827NIAID NIH HHS P01 AI071713NIAID NIH HHS P30 AI027763
6 · The paper itself

Abstract

While the relationship of protective human leukocyte antigen (HLA) class I alleles and HIV progression is well defined, the interaction of HLA-mediated protection and CD8 T-cell exhaustion is less well characterized. To gain insight into the influence of HLA-B*57:01 on the deterioration of CD8 T-cell responses during HIV infection in the absence of antiretroviral treatment, we compared HLA-B*57:01-restricted HIV-specific CD8 T-cell responses to responses restricted by other HLA class I alleles longitudinally after control of peak viremia. Detailed characterization of polyfunctionality, differentiation phenotypes, transcription factor, and inhibitory receptor expression revealed progression of CD8 T-cell exhaustion over the course of the infection in both patient groups. However, early effects on the phenotype of the total CD8 T-cell population were apparent only in HLA-B*57-negative patients. The HLA-B*57:01-restricted, HIV epitope-specific CD8 T-cell responses showed beneficial functional patterns and significantly lower frequencies of inhibitory receptor expression, i.e., PD-1 and coexpression of PD-1 and TIGIT, within the first year of infection. Coexpression of PD-1 and TIGIT was correlated with clinical markers of disease progression and declining percentages of the T-bet

Indexed as

Gene Expression RegulationAdultCD8-Positive T-LymphocytesFemaleHIV-1HIV InfectionsHLA-B AntigensHumansMaleMiddle AgedProgrammed Cell Death 1 ReceptorReceptors, ImmunologicHLA-B*57:01 antigenHLA-B AntigensPDCD1 protein, humanProgrammed Cell Death 1 ReceptorReceptors, ImmunologicTIGIT protein, humanCD4CD8-positive T lymphocytescellular immunitydisease progressionevolutionHIV-1HIV Gaghuman HLA-B*5701 antigenmolecular evolutionPD-1programmed cell death protein 1T-cell immunoreceptor with Ig and ITIM domainTIGITviral load

Identifiers

PMID32350076
PMCPMC7343205
OpenAlexW3023412722

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.