Evidence map›Paper›PMID 32348307›Full record

ArticlePloS one2020

Impact of smoking cessation, coffee and bread consumption on the intestinal microbial composition among Saudis: A cross-sectional study.

Steve Harakeh, Emmanouil Angelakis, Timokratis Karamitros, Dipankar Bachar, Suhad Bahijri, Ghada Ajabnoor, Sulaiman M Alfadul, Suha A Farraj, Turki Al Amri, Ahmed Al-Hejin and 4 more

RetractedErratum issuedOpen access · goldAbstract read
In one paragraph

Article in PloS one, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It has been retracted, and should not be counted. Cited by 22 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed, 1 pooled it
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 1 synthesis or guideline pooled it, 39 citations in OpenAlex.

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  12. The gut microbiome: a core regulator of metabolism.The Journal of endocrinology · 2023
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

14 authors at 5 institutions in 3 countries.

Steve HarakehSpecial Infectious Agents Unit, King Fahd Medical Research Center, King Abdulaziz University, Jeddah, Saudi Arabia.ORCID 0000-0001-7512-8787
Emmanouil AngelakisAix Marseille Université, IRD, APHM, VITROME, IHU-Méditerranée Infection, Marseille, France.
Timokratis KaramitrosUnit of Bioinformatics and Applied Genomics, Hellenic Pasteur Institute, Athens, Greece.ORCID 0000-0003-0841-9159
Dipankar BacharAix Marseille Université, IRD, APHM, VITROME, IHU-Méditerranée Infection, Marseille, France.
Suhad BahijriClinical Biochemistry Department, College of Medicine, Nutrition unit, King Fahd Medical Research Center, King Abdulaziz University, Jeddah, Saudi Arabia.
Ghada AjabnoorClinical Biochemistry Department, College of Medicine, Nutrition unit, King Fahd Medical Research Center, King Abdulaziz University, Jeddah, Saudi Arabia.
Sulaiman M AlfadulKing Abdulaziz city for Science and Technology, Riyadh, Saudi Arabia.
Suha A FarrajSpecial Infectious Agents Unit, King Fahd Medical Research Center, King Abdulaziz University, Jeddah, Saudi Arabia.
Turki Al AmriFamily and Community Medicine department, Faculty of Medicine-Rabigh Branch, King Abdulaziz University, Jeddah, Saudi Arabia.
Ahmed Al-HejinBiological Sciences Department, Faculty of Science, King Abdulaziz University, Jeddah, Saudi Arabia.
Abdalla AhmedDepartment of Medical Microbiology, Faculty of Medicine, Umm Al-Qura University, Makkah, Saudi Arabia.
Ahmed A MirzaSpecial Infectious Agents Unit, King Fahd Medical Research Center, King Abdulaziz University, Jeddah, Saudi Arabia.
Raoult DidierAix Marseille Université, IRD, APHM, MEPHI, IHU-Méditerranée Infection, Marseille, France.
Esam I AzharSpecial Infectious Agents Unit, King Fahd Medical Research Center, King Abdulaziz University, Jeddah, Saudi Arabia.
King Abdulaziz University · SAAix-Marseille Université · FRKing Abdulaziz City for Science and Technology · SAPasteur Hellenic Institute · GRUmm al-Qura University · SA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The gut microbiota is often affected by the dietary and lifestyle habits of the host, resulting in a better efficacy that favors energy harvesting from the consumed food. Our objective was to characterize the composition of gut microbiota in adult Saudis and investigate possible association with lifestyle and dietary practices. Feces from 104 Saudi volunteers (48% males) were tested for microbiota by sequencing the V3-V4 region of bacterial 16S ribosomal RNA (rRNA). For all participants, data were collected related to their lifestyle habits and dietary practices. The relative abundance (RA) of Fusobacteria was significantly higher in normal weight Saudis (P = 0.005, false discovery rate-FDR = 0.014). Individuals who consumed more coffee presented marginally significant more RA of Fusobacteria (P = 0.02, FDR = 0.20) in their gut microbiota compared to those reporting low or no coffee intake, but the RA of Fusobacteria was significantly higher in smokers compared to non-smokers (P = 0.009, FDR = 0.027). The RA of Fusobacteria was also significantly higher in those reporting daily consumption of bread (P = 0.005, FDR = 0.015). At the species level, the gut microbiota of people who consumed coffee was dominated by Bacteroides thetaiotaomicron followed by Phascolarctobacterium faecium and Eubacterium rectale. Similarly, the gut microbiota of smokers was also enriched by B. thetaiotaomicron and Lactobacillus amylovorus. Smoking cessation, bread and coffee consumption induce changes in the intestinal microbial composition of Saudis. This indicates the significance of diet and lifestyle practices in the determination of the composition of the gut microbiota, which could possibly lead later to changes in metabolic profile and weight.

Indexed as

BreadCoffeeGastrointestinal MicrobiomeSmoking CessationAdolescentAdultAgedAged, 80 and overCross-Sectional StudiesFemaleHumansMaleMiddle AgedSaudi ArabiaYoung AdultCoffee

Identifiers

PMID32348307
PMCPMC7190147
OpenAlexW3019999252

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.