Evidence map›Paper›PMID 32347567›Full record

ArticleThe EMBO journal2020

Splice-dependent trans-synaptic PTPδ-IL1RAPL1 interaction regulates synapse formation and non-REM sleep.

Haram Park, Yeonsoo Choi, Hwajin Jung, Seoyeong Kim, Suho Lee, Hyemin Han, Hanseul Kweon, Suwon Kang, Woong Seob Sim, Frank Koopmans and 5 more

Open access · hybridAbstract read
In one paragraph

Article in The EMBO journal, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 48 citations in OpenAlex.

  1. Article
  2. Alternative microexon splicing code for a four-amino acid peptide of PTPRD governs behavioral development.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  3. Article
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  5. Review
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  9. Cell Adhesion Molecule Signaling at the Synapse: Beyond the Scaffold.Cold Spring Harbor perspectives in biology · 2024
    Review
  10. Article
  11. iScience · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 4 institutions in 1 country.

Haram Park *Center for Synaptic Brain Dysfunctions, Institute for Basic Science (IBS), Daejeon, Korea.
Yeonsoo Choi *Center for Synaptic Brain Dysfunctions, Institute for Basic Science (IBS), Daejeon, Korea.
Hwajin Jung *Center for Synaptic Brain Dysfunctions, Institute for Basic Science (IBS), Daejeon, Korea.
Seoyeong Kim *Department of Biological Sciences, Korea Advanced Institute for Science and Technology (KAIST), Daejeon, Korea.
Suho LeeCenter for Synaptic Brain Dysfunctions, Institute for Basic Science (IBS), Daejeon, Korea.
Hyemin HanDepartment of Anatomy and Neurobiology, School of Dentistry, Kyungpook National University, Daegu, Korea.
Hanseul KweonDepartment of Biological Sciences, Korea Advanced Institute for Science and Technology (KAIST), Daejeon, Korea.
Suwon KangDepartment of Biological Sciences, Korea Advanced Institute for Science and Technology (KAIST), Daejeon, Korea.
Woong Seob SimDepartment of Biological Sciences, Korea Advanced Institute for Science and Technology (KAIST), Daejeon, Korea.
Frank KoopmansDepartment of Functional Genomics, CNCR, VU University and UMC Amsterdam, Amsterdam, The Netherlands.ORCID 0000-0002-4973-5732
Esther YangDepartment of Anatomy and Division of Brain Korea 21, Biomedical Science, College of Medicine, Korea University, Seoul, Korea.
Hyun KimDepartment of Anatomy and Division of Brain Korea 21, Biomedical Science, College of Medicine, Korea University, Seoul, Korea.
August B SmitDepartment of Molecular and Cellular Neurobiology, CNCR, VU University and UMC Amsterdam, Amsterdam, The Netherlands.
Yong Chul BaeDepartment of Anatomy and Neurobiology, School of Dentistry, Kyungpook National University, Daegu, Korea.
Eunjoon KimCenter for Synaptic Brain Dysfunctions, Institute for Basic Science (IBS), Daejeon, Korea.ORCID 0000-0001-5518-6584
Korea Advanced Institute of Science and Technology · KRInstitute for Basic Science · KRKorea University · KRKyungpook National University · KR

Funding

Institute for Basic Science IBS-R002-D1National Research Foundation of Korea NRF-2017R1A5A2015391
6 · The paper itself

Abstract

Alternative splicing regulates trans-synaptic adhesions and synapse development, but supporting in vivo evidence is limited. PTPδ, a receptor tyrosine phosphatase adhering to multiple synaptic adhesion molecules, is associated with various neuropsychiatric disorders; however, its in vivo functions remain unclear. Here, we show that PTPδ is mainly present at excitatory presynaptic sites by endogenous PTPδ tagging. Global PTPδ deletion in mice leads to input-specific decreases in excitatory synapse development and strength. This involves tyrosine dephosphorylation and synaptic loss of IL1RAPL1, a postsynaptic partner of PTPδ requiring the PTPδ-meA splice insert for binding. Importantly, PTPδ-mutant mice lacking the PTPδ-meA insert, and thus lacking the PTPδ interaction with IL1RAPL1 but not other postsynaptic partners, recapitulate biochemical and synaptic phenotypes of global PTPδ-mutant mice. Behaviorally, both global and meA-specific PTPδ-mutant mice display abnormal sleep behavior and non-REM rhythms. Therefore, alternative splicing in PTPδ regulates excitatory synapse development and sleep by modulating a specific trans-synaptic adhesion.

Indexed as

Sleep StagesAnimalsInterleukin-1 Receptor Accessory ProteinMiceMice, Inbred BALB CMice, KnockoutProtein Tyrosine PhosphatasesSynapsesInterleukin-1 Receptor Accessory Proteininterleukin-1 receptor accessory protein-like 1, mouseProtein Tyrosine Phosphatasesalternative splicingreceptor tyrosine phosphatasesleep behavior and rhythmsynapse developmentsynaptic adhesion

Identifiers

PMID32347567
PMCPMC7265247
OpenAlexW3019365457

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.