Evidence map›Paper›PMID 32347199›Full record

ArticleEuro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin2020

Two multi-fragment recombination events resulted in the β-lactam-resistant serotype 11A-ST6521 related to Spain9V-ST156 pneumococcal clone spreading in south-western Europe, 2008 to 2016.

Aida González-Díaz, Miguel P Machado, Jordi Càmara, José Yuste, Emmanuelle Varon, Miriam Domenech, María Del Grosso, José María Marimón, Emilia Cercenado, Nieves Larrosa and 8 more

Open access · diamondAbstract read
In one paragraph

Article in Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed, 1 pooled it
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 1 synthesis or guideline pooled it, 22 citations in OpenAlex.

  1. Pooled it
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  5. SARS-CoV-2 andFrontiers in cellular and infection microbiology · 2025
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  6. Dynamics of Antibiotic Resistance ofAntibiotics (Basel, Switzerland) · 2023
    Article
  7. Review
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  10. Article
  11. Article
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  13. Article
  14. Pharmacokinetic/pharmacodynamic evaluation of the antimicrobial therapy of pneumococcal invasive disease in adults in post-PCV13 vaccine period in Madrid, Spain.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2021
    Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 11 institutions in 4 countries.

Aida González-DíazMicrobiology Department, Hospital Universitari Bellvitge, IDIBELL-UB, L'Hospitalet de LLobregat, Spain.
Miguel P MachadoInstitute of Microbiology, Institute of Molecular Medicine, Faculty of Medicine, University of Lisbon, Lisbon, Portugal.
Jordi CàmaraMicrobiology Department, Hospital Universitari Bellvitge, IDIBELL-UB, L'Hospitalet de LLobregat, Spain.
José YusteResearch Network for Respiratory Diseases (CIBERES), ISCIII, Madrid, Spain.
Emmanuelle VaronNational Reference Centre for Pneumococci, Centre Hospitalier Intercommunal de Créteil, Créteil, France.
Miriam DomenechPneumococcal Reference Laboratory, Centro Nacional de Referencia, ISCIII, Madrid, Spain.
María Del GrossoInfection Diseases Department, Istituto Superiore di Sanità, Rome, Italy.
José María MarimónResearch Network for Respiratory Diseases (CIBERES), ISCIII, Madrid, Spain.
Emilia CercenadoResearch Network for Respiratory Diseases (CIBERES), ISCIII, Madrid, Spain.
Nieves LarrosaMicrobiology Department, Hospital Universitari Vall d'Hebron, UAB, Barcelona, Spain.
María Dolores QuesadaMicrobiology Department, Clinical Laboratory North Metropolitan Area, Hospital Universitari Germans Trias i Pujol, UAB, Badalona, Spain.
Dionisia FontanalsMicrobiology Department, Hospital Universitari Parc Taulí, Sabadell, Spain.
Assiya El-MniaiNational Reference Centre for Pneumococci, Centre Hospitalier Intercommunal de Créteil, Créteil, France.
Meritxell CuberoMicrobiology Department, Hospital Universitari Bellvitge, IDIBELL-UB, L'Hospitalet de LLobregat, Spain.
João A CarriçoInstitute of Microbiology, Institute of Molecular Medicine, Faculty of Medicine, University of Lisbon, Lisbon, Portugal.
Sara MartíMicrobiology Department, Hospital Universitari Bellvitge, IDIBELL-UB, L'Hospitalet de LLobregat, Spain.
Mario RamirezInstitute of Microbiology, Institute of Molecular Medicine, Faculty of Medicine, University of Lisbon, Lisbon, Portugal.
Carmen ArdanuyMicrobiology Department, Hospital Universitari Bellvitge, IDIBELL-UB, L'Hospitalet de LLobregat, Spain.
Centre for Biomedical Network Research on Rare Diseases · ESUniversity of Lisbon · PTHôpital Intercommunal de Créteil · FRInstituto de Salud Carlos III · ESBellvitge University Hospital · ESBiogipuzkoa Health Research Institute · ESDeleted InstitutionHospital Universitari Germans Trias i Pujol · ESInstitut d'Investigació Biomédica de Bellvitge · ESIstituto Superiore di Sanità · ITVall d'Hebron Hospital Universitari · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

BackgroundThe successful pneumococcal clone Spain9V-ST156 (PMEN3) is usually associated with vaccine serotypes 9V and 14.AimOur objective was to analyse the increase of a serotype 11A variant of PMEN3 as cause of invasive pneumococcal disease (IPD) in Spain and its spread in south-western Europe.MethodsWe conducted a prospective multicentre study of adult IPD in Spain (2008-16). Furthermore, a subset of 61 penicillin-resistant serotype 11A isolates from France, Italy, Portugal and Spain were subjected to whole genome sequencing (WGS) and compared with 238 genomes from the European Nucleotide Archive (ENA).ResultsAlthough the incidence of serotype 11A in IPD was stable, a clonal shift was detected from CC62 (penicillin-susceptible) to CC156 (penicillin-resistant). By WGS, three major 11A-CC156 lineages were identified, linked to ST156 (n = 5 isolates; France, Italy and Portugal), ST166 (n = 4 isolates; France and Portugal) and ST838/6521 (n = 52 isolates; France, Portugal and Spain). Acquisition of the 11A capsule allowed to escape vaccine effect. AP200 (11A-ST62) was the donor for ST156 and ST838/6521 but not for ST166. In-depth analysis of ST838/6521 lineage showed two multi-fragment recombination events including four and seven fragments from an 11A-ST62 and an NT-ST344 representative, respectively.ConclusionThe increase in penicillin-resistant serotype 11A IPD in Spain was linked to the spread of a vaccine escape PMEN3 recombinant clone. Several recombination events were observed in PMEN3 acquiring an 11A capsule. The most successful 11A-PMEN3 lineage spreading in south-western Europe appeared after two multi-fragment recombination events with representatives of two major pneumococcal clones (11A-ST62 and NT-ST344).

Indexed as

AdolescentAdultbeta-LactamsClone CellsDrug Resistance, BacterialHumansMiddle AgedMultilocus Sequence TypingPenicillin ResistancePneumococcal InfectionsPneumococcal VaccinesProspective StudiesSerotypingSpainStreptococcus pneumoniaeWhole Genome Sequencingbeta-LactamsPneumococcal VaccinesCC156Multi-fragment recombinationStreptococcus pneumoniaevaccine escape

Identifiers

PMID32347199
PMCPMC7189650
OpenAlexW3019172999

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.