Evidence map›Paper›PMID 32346763›Full record

ArticleExtremophiles : life under extreme conditions2020

Biochemical comparison of two glucose 6-phosphate dehydrogenase isozymes from a cold-adapted Pseudomonas mandelii.

Quynh DangThu, Sei-Heon Jang, ChangWoo Lee

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In one paragraph

Article in Extremophiles : life under extreme conditions, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Quynh DangThuDepartment of Biomedical Science and Center for Bio-Nanomaterials, Daegu University, Gyeongsan, 38453, South Korea.
Sei-Heon JangDepartment of Biomedical Science and Center for Bio-Nanomaterials, Daegu University, Gyeongsan, 38453, South Korea.
ChangWoo LeeDepartment of Biomedical Science and Center for Bio-Nanomaterials, Daegu University, Gyeongsan, 38453, South Korea. leec@daegu.ac.kr.
Daegu University · KR

Funding

National Research Foundation of Korea NRF-2018R1D1A3B07048635
6 · The paper itself

Abstract

Cold-adapted bacteria primarily have two glucose 6-phosphate dehydrogenase isozymes (G6PD, also known as zwf), zwf-1 for the Entner-Doudoroff pathway and zwf-2 for the oxidative pentose phosphate pathway. Although the roles of zwfs in carbon metabolism and antioxidant defense have been reported, the biochemical properties of zwfs at low and moderate temperatures have not been fully described. In this study, we cloned and characterized zwf-1 (Pmzwf-1) and zwf-2 (Pmzwf-2) from a cold-adapted bacterium Pseudomonas mandelii JR-1. Pmzwf-1 and Pmzwf-2 were expressed in Escherichia coli BL21 (DE3) as soluble tetrameric proteins. Both Pmzwf proteins were active at 4 °C, but Pmzwf-1 exhibited overall better biochemical properties than those of Pmzwf-2, including 10-30% higher specific activity at 4-40 °C as well as consistent conformational flexibility and thermal stability in the 4-40 °C range. Pmzwf-2 showed reduced thermal stability at moderate temperatures. Furthermore, the mRNA expression of Pmzwf-1 was higher than that of Pmzwf-2 at both 4 °C and 25 °C. These results indicate that Pmzwfs are cold-adapted enzymes, but Pmzwf-1 can function at both low to moderate temperatures while Pmzwf-2 is primarily functional at low temperatures. Our results suggest distinct temperature adaptations of two G6PD isozymes in P. mandelii JR-1, adaptations that are metabolic pathway dependent.

Indexed as

PseudomonasGlucoseGlucosephosphate DehydrogenaseIsoenzymesPhosphatesGlucoseGlucosephosphate DehydrogenaseIsoenzymesPhosphatesCold adaptationGlucose 6-phosphate dehydrogenasePseudomonas mandeliiZwf-1Zwf-2

Identifiers

PMID32346763
OpenAlexW3017697074

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.