Evidence map›Paper›PMID 32345346›Full record

ArticleGenome biology2020

REPIC: a database for exploring the N

Shun Liu, Allen Zhu, Chuan He, Mengjie Chen

Abstract read
In one paragraph

Article in Genome biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 71 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
71citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

71 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. RNA methylation in vascular disease: a systematic review.Journal of cardiothoracic surgery · 2022
    Pooled it
  2. Review
  3. Programmable RNA NAdvanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Functional Prediction of Epitranscriptome.Methods in molecular biology (Clifton, N.J.) · 2026
    Article
  9. Article
  10. Review
  11. The landscape of NNature genetics · 2025
    Article
  12. Article
  13. Review
  14. Review
  15. Article
  16. ExploringHorticulture research · 2024
    Article
  17. Article
  18. Article
  19. Article
  20. Article

11 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Shun LiuSection of Genetic Medicine, Department of Medicine, The University of Chicago, Chicago, IL, 60637, USA.
Allen ZhuDepartment of Chemistry and Institute for Biophysical Dynamics, The University of Chicago, Chicago, IL, 60637, USA.
Chuan HeDepartment of Chemistry and Institute for Biophysical Dynamics, The University of Chicago, Chicago, IL, 60637, USA.
Mengjie ChenSection of Genetic Medicine, Department of Medicine, The University of Chicago, Chicago, IL, 60637, USA. mengjiechen@uchicago.edu.

Funding

MEDICAL SCIENTIST TRAININGT32GM007281 · NIGMS · UNIVERSITY OF CHICAGO · PI CLARK, MARCUS RAMSAY · 1985 to 2022
$32.1M
Transcriptome-wide base-resolution sequencing of pseudouridine in human normal and AD brain tissues-CEGS Admin supplement 2020-2021RM1HG008935 · NHGRI · UNIVERSITY OF CHICAGO · PI HE, CHUAN · 2016 to 2025
$24.4M
New directions in single cell genomics method developmentR01GM126553 · NIGMS · UNIVERSITY OF CHICAGO · PI Mengjie Chen · 2017 to 2026
$2.9M
The Effects of ERK2-Induced Phosphorylation of METTL3 on N6-methyladenosine (m6A) mRNA Methylation in MelanomaF30CA247175 · NCI · UNIVERSITY OF CHICAGO · PI ZHU, ALLEN C · 2020 to 2023
$192k
NCI NIH HHS F30 CA247175NHGRI NIH HHS RM1 HG008935NIGMS NIH HHS R01 GM126553NIGMS NIH HHS T32 GM007281
6 · The paper itself

Abstract

The REPIC (RNA EPItranscriptome Collection) database records about 10 million peaks called from publicly available m

Indexed as

Databases, Nucleic AcidAdenosineAnimalsCell LineChromatinEpigenomicsHistone CodeHumansMiceOrgan SpecificityRNAAdenosineChromatinN-methyladenosineRNADatabaseGenome browserm6A modificationTissue specificity

Identifiers

PMID32345346
PMCPMC7187508

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.