Evidence map›Paper›PMID 32343700›Full record

ArticlePloS one2020

Identification of QTL for perenniality and floral scent in cowpea (Vigna unguiculata [L.] Walp.).

Sassoum Lo, Christian Fatokun, Ousmane Boukar, Paul Gepts, Timothy J Close, María Muñoz-Amatriaín

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Revisiting the Domestication Process of AfricanPlants (Basel, Switzerland) · 2022
    Review
  9. WalnutFrontiers in plant science · 2022
    Article
  10. Article
  11. Review
  12. Introgression Breeding in Cowpea [Frontiers in plant science · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 2 countries.

Sassoum LoDepartment of Botany and Plant Sciences, University of California Riverside, Riverside, CA, United States of America.ORCID 0000-0002-0385-5691
Christian FatokunInternational Institute of Tropical Agriculture, Ibadan, Nigeria.
Ousmane BoukarInternational Institute of Tropical Agriculture, Ibadan, Nigeria.
Paul GeptsDepartment of Plant Sciences, University of California Davis, Davis, CA, United States of America.
Timothy J CloseDepartment of Botany and Plant Sciences, University of California Riverside, Riverside, CA, United States of America.
María Muñoz-AmatriaínDepartment of Soil and Crop Sciences, Colorado State University, Fort Collins, CO, United States of America.
International Institute of Tropical Agriculture · NGUniversity of California, Riverside · USColorado State University · USUniversity of California, Davis · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Perennial habit and floral scent are major traits that distinguish domesticated cowpeas from their wild relatives. However, the genetic basis of these two important traits remains largely unknown in cowpea. Plant longevity, a perenniality-related trait, and floral scent, an outcrossing trait, were investigated using a RIL population derived from a cross between a domesticated and a wild cowpea. QTL analysis revealed three significant loci, one on chromosome 8 associated with plant longevity and two, on chromosomes 1 and 11, for floral scent. Genes within the QTL regions were identified. Genes encoding an F-box protein (Vigun08g215300) and two kinases (Vigun08g217000, Vigun08g217800), and involved in physiological processes including regulation of flowering time and plant longevity, were identified within the perenniality QTL region. A cluster of O-methyltransferase genes (Vigun11g096800, Vigun11g096900, Vigun11g097000, Vigun11g097600, and Vigun11g097800) was identified within the floral scent QTL region. These O-methyltransferase cowpea genes are orthologs of the Arabidopsis N-acetylserotonin O-methyltransferase (ASMT) gene, which is involved in the biosynthesis of melatonin. Melatonin is an indole derivative, which is an essential molecule for plant interactions with pollinators. These findings lay the foundation for further exploration of the genetic mechanisms of perenniality and floral scent in cowpea. Knowledge from this study can help in the development of new extended-growth cycle lines with increased yield or lines with increased outcrossing for population breeding.

Indexed as

Chromosomes, PlantFlowersGenetic Association StudiesGenetics, PopulationInbreedingLinear ModelsMelatoninOdorantsPhenotypeQuantitative Trait LociVignaMelatonin

Identifiers

PMID32343700
PMCPMC7188242
OpenAlexW3018334732

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.