Evidence map›Paper›PMID 32343484›Full record

ArticleGenesis (New York, N.Y. : 2000)2020

A reporter mouse for in vivo detection of DNA damage in embryonic germ cells.

Jordana C Bloom, John C Schimenti

Open access · greenAbstract read
In one paragraph

Article in Genesis (New York, N.Y. : 2000), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.3field-weighted citation impact, top 47% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Jordana C BloomDepartment of Biomedical Sciences, Cornell University, Ithaca, New York, USA.ORCID 0000-0002-5989-9255
John C SchimentiDepartment of Biomedical Sciences, Cornell University, Ithaca, New York, USA.ORCID 0000-0002-7294-1876
Cornell University · US

Funding

Identification and Functional Validation of Human Infertility AllelesR01HD082568 · NICHD · CORNELL UNIVERSITY · PI SCHIMENTI, JOHN C · 2015 to 2024
$6.0M
Research and Career Training in Vertebrate Developmental GenomicsT32HD057854 · NICHD · CORNELL UNIVERSITY · PI SCHIMENTI, JOHN C · 2010 to 2020
$1.3M
Broad wavelength range Zeiss 780 NLO/confocal system for the Cornell Imaging CoreS10OD018516 · OD · CORNELL UNIVERSITY · PI ZIPFEL, WARREN R · 2014 to 2014
$834k
A Light Sheet Microscope for the Cornell BRC Imaging FacilityS10OD023466 · OD · CORNELL UNIVERSITY · PI WILLIAMS, REBECCA M · 2017 to 2017
$364k
Eunice Kennedy Shriver National Institute of Child Health and Human Development R01HD082568Eunice Kennedy Shriver National Institute of Child Health and Human Development T32HD057854NICHD NIH HHS R01 HD082568NICHD NIH HHS T32 HD057854NIH HHS S10 OD018516NIH HHS S10 OD023466NIH Office of the Director S10-OD018516
6 · The paper itself

Abstract

Maintaining genome integrity in the germline is essential for survival and propagation of a species. In both mouse and human, germ cells originate during fetal development and are hypersensitive to both endogenous and exogenous DNA damaging agents. Currently, mechanistic understanding of how primordial germ cells respond to DNA damage is limited in part by the tools available to study these cells. We developed a mouse transgenic reporter strain expressing a 53BP1-mCherry fusion protein under the control of the Oct4ΔPE embryonic germ cell-specific promoter. This reporter binds sites of DNA double strand breaks (DSBs) on chromatin, forming foci. Using ionizing radiation as a DNA DSB-inducing agent, we show that the transgenic reporter expresses specifically in the embryonic germ cells of both sexes and forms DNA damage induced foci in both a dose- and time-dependent manner. The dynamic time-sensitive and dose-sensitive DNA damage detection ability of this transgenic reporter, in combination with its specific expression in embryonic germ cells, makes it a versatile and valuable tool for increasing our understanding of DNA damage responses in these unique cells.

Indexed as

DNA DamageGenes, ReporterAnimalsChromatinDNA Breaks, Double-StrandedEmbryonic Germ CellsFemaleGenetic EngineeringLuminescent ProteinsMaleMiceMice, Inbred C57BLOctamer Transcription Factor-3Protein BindingRed Fluorescent ProteinChromatinLuminescent ProteinsOctamer Transcription Factor-3Pou5f1 protein, mouseRed Fluorescent ProteinDNA damageDNA repairdouble strand breaksfertilityprimordial germ cells

Identifiers

PMID32343484
PMCPMC7897368
OpenAlexW3017443701

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.