Evidence map›Paper›PMID 32343012›Full record

ArticleThe European journal of neuroscience2020

Informed feature regularization in voxelwise modeling for naturalistic fMRI experiments.

Özgür Yılmaz, Emin Çelik, Tolga Çukur

Open access · bronzeAbstract read
In one paragraph

Article in The European journal of neuroscience, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.2field-weighted citation impact, top 51% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 2 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 2 countries.

Özgür YılmazNational Magnetic Resonance Research Center, Bilkent University, Ankara, Turkey.ORCID 0000-0001-7375-9171
Emin ÇelikNational Magnetic Resonance Research Center, Bilkent University, Ankara, Turkey.
Tolga ÇukurNational Magnetic Resonance Research Center, Bilkent University, Ankara, Turkey.ORCID 0000-0002-2296-851X
Bilkent University · TR

Funding

Visual Representation and AttentionR01EY019684 · NEI · UNIVERSITY OF CALIFORNIA BERKELEY · PI GALLANT, JACK L · 2010 to 2018
$2.9M
Attentional Modulation of Brain RepresentationsR01EY022454 · NEI · UNIVERSITY OF CALIFORNIA BERKELEY · PI GALLANT, JACK L · 2013 to 2016
$1.6M
ASELSAN PhD scholarshipBAGEP 2017 fellowshipEuropean Molecular Biology Organization Installation Grant IG 3028Marie Curie Action Career Integration Grant PCIG13-GA-2013-618101National Eye Institute Grant EY019684NEI NIH HHS R01 EY019684NEI NIH HHS R01 EY022454NVIDIA GPU GrantTUBA GEBIP 2015 fellowshipTUBITAK-BIDEB 2211 scholarship
6 · The paper itself

Abstract

Voxelwise modeling is a powerful framework to predict single-voxel functional selectivity for the stimulus features that exist in complex natural stimuli. Yet, because VM disregards potential correlations across stimulus features or neighboring voxels, it may yield suboptimal sensitivity in measuring functional selectivity in the presence of high levels of measurement noise. Here, we introduce a novel voxelwise modeling approach that simultaneously utilizes stimulus correlations in model features and response correlations among voxel neighborhoods. The proposed method performs feature and spatial regularization while still generating single-voxel response predictions. We demonstrated the performance of our approach on a functional magnetic resonance imaging dataset from a natural vision experiment. Compared to VM, the proposed method yields clear improvements in prediction performance, together with increased feature coherence and spatial coherence of voxelwise models. Overall, the proposed method can offer improved sensitivity in modeling of single voxels in naturalistic functional magnetic resonance imaging experiments.

Indexed as

Magnetic Resonance ImagingVision, OcularBrainBrain MappingImage Processing, Computer-Assistedcomputational neurosciencefeature regularizationmodelingstimulus correlation

Identifiers

PMID32343012
PMCPMC9748846
OpenAlexW3017824787

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.