Evidence map›Paper›PMID 32341526›Full record

ArticleNature genetics2020

Genetic identification of cell types underlying brain complex traits yields insights into the etiology of Parkinson's disease.

Julien Bryois, Nathan G Skene, Thomas Folkmann Hansen, Lisette J A Kogelman, Hunna J Watson, Zijing Liu, Eating Disorders Working Group of the Psychiatric Genomics Consortium, International Headache Genetics Consortium, 23andMe Research Team, Leo Brueggeman and 5 more

Open access · bronzeAbstract read
In one paragraph

Article in Nature genetics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 243 papers, 11 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
243citing papers in PubMed, 11 pooled it
39.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

243 citing papers in PubMed, 11 syntheses or guidelines pooled it, 371 citations in OpenAlex.

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183 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 20 institutions in 26 countries.

Julien Bryois *Department of Medical Epidemiology and Biostatistics, Karolinska Institutet, Stockholm, Sweden.
Nathan G Skene *Department of Medical Biochemistry and Biophysics, Karolinska Institutet, Stockholm, Sweden.
Thomas Folkmann HansenDanish Headache Center, Dept of Neurology, Copenhagen University Hospital, Glostrup, Denmark.ORCID http://orcid.org/0000-0001-6703-7762
Lisette J A KogelmanDanish Headache Center, Dept of Neurology, Copenhagen University Hospital, Glostrup, Denmark.
Hunna J WatsonDepartment of Psychiatry, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA.ORCID http://orcid.org/0000-0001-8405-381X
Zijing LiuDivision of Brain Sciences, Department of Medicine, Imperial College, London, UK.
Eating Disorders Working Group of the Psychiatric Genomics Consortium
International Headache Genetics Consortium
23andMe Research Team
Leo BrueggemanDepartment of Psychiatry, University of Iowa Carver College of Medicine, University of Iowa, Iowa City, IA, USA.
Gerome BreenInstitute of Psychiatry, MRC Social, Genetic and Developmental Psychiatry Centre, King's College London, London, UK.ORCID http://orcid.org/0000-0003-2053-1792
Cynthia M BulikDepartment of Medical Epidemiology and Biostatistics, Karolinska Institutet, Stockholm, Sweden.
Ernest ArenasDepartment of Medical Biochemistry and Biophysics, Karolinska Institutet, Stockholm, Sweden.ORCID http://orcid.org/0000-0003-0197-6577
Jens Hjerling-LefflerDepartment of Medical Biochemistry and Biophysics, Karolinska Institutet, Stockholm, Sweden. jens.hjerling-leffler@ki.se.ORCID http://orcid.org/0000-0002-4539-1776
Patrick F SullivanDepartment of Medical Epidemiology and Biostatistics, Karolinska Institutet, Stockholm, Sweden. patrick.sullivan@ki.se.ORCID http://orcid.org/0000-0002-6619-873X
University of North Carolina at Chapel Hill · US23andMe (United States) · USBroad Institute · USKing's College London · GBUniversity of Helsinki · FIOslo University Hospital · NOKarolinska Institutet · SELeiden University Medical Center · NLPoznan University of Medical Sciences · PLUniversity of Padua · ITNational Health Service · GBdeCODE Genetics (Iceland) · ISHarvard University · USChildren's Hospital of Philadelphia · USInserm · FRQIMR Berghofer Medical Research Institute · AUAarhus University · DKStockholm County Council · SEThe University of Queensland · AUUniversitat Pompeu Fabra · ES

Funding

MEDICAL SCIENTIST TRAINING PROGRAMT32GM007337 · NIGMS · UNIVERSITY OF IOWA · PI GEYER, PAMELA K., LENTZ, STEVEN R · 1985 to 2020
$15.9M
A Large-Scale Schizophrenia Association Study in SwedenR01MH077139 · NIMH · UNIV OF NORTH CAROLINA CHAPEL HILL · PI SULLIVAN, PATRICK F · 2007 to 2018
$9.9M
1/7 PGC: Advancing Discovery and ImpactR01MH124871 · NIMH · UNIV OF NORTH CAROLINA CHAPEL HILL · PI BULIK, CYNTHIA M, SULLIVAN, PATRICK F · 2021 to 2025
$3.5M
1/7 Psychiatric Genomics Consortium: Finding actionable variationU01MH109528 · NIMH · UNIV OF NORTH CAROLINA CHAPEL HILL · PI SULLIVAN, PATRICK F · 2016 to 2020
$2.5M
European Research Council 819540Medical Research CouncilNIGMS NIH HHS T32 GM007337NIMH NIH HHS R01 MH077139NIMH NIH HHS R01 MH124871NIMH NIH HHS U01 MH109528Swiss National Science Foundation 165049Wellcome Trust 108726Wellcome Trust 108726/Z/15/Z
6 · The paper itself

Abstract

Genome-wide association studies have discovered hundreds of loci associated with complex brain disorders, but it remains unclear in which cell types these loci are active. Here we integrate genome-wide association study results with single-cell transcriptomic data from the entire mouse nervous system to systematically identify cell types underlying brain complex traits. We show that psychiatric disorders are predominantly associated with projecting excitatory and inhibitory neurons. Neurological diseases were associated with different cell types, which is consistent with other lines of evidence. Notably, Parkinson's disease was genetically associated not only with cholinergic and monoaminergic neurons (which include dopaminergic neurons) but also with enteric neurons and oligodendrocytes. Using post-mortem brain transcriptomic data, we confirmed alterations in these cells, even at the earliest stages of disease progression. Our study provides an important framework for understanding the cellular basis of complex brain maladies, and reveals an unexpected role of oligodendrocytes in Parkinson's disease.

Indexed as

AnimalsBrainGenome-Wide Association StudyHumansMiceNeuronsParkinson DiseaseTranscriptome

Identifiers

PMID32341526
PMCPMC7930801
OpenAlexW3019747475

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.