Evidence map›Paper›PMID 32341520›Full record

ArticleLaboratory investigation; a journal of technical methods and pathology2020

Molecular signatures of tumor progression in myxoid liposarcoma identified by N-glycan mass spectrometry imaging.

Bram Heijs, Stephanie Holst-Bernal, Marieke A de Graaff, Inge H Briaire-de Bruijn, Mar Rodriguez-Girondo, Michiel A J van de Sande, Manfred Wuhrer, Liam A McDonnell, Judith V M G Bovée

Abstract read
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In one paragraph

Article in Laboratory investigation; a journal of technical methods and pathology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 27 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. High sensitivity glycomics in biomedicine.Mass spectrometry reviews · 2022
    Review
  8. High-Throughput Glycomic Methods.Chemical reviews · 2022
    Review
  9. High-MannoseCancers · 2022
    Article
  10. Proteomic and Metabolomic Profiling in Soft Tissue Sarcomas.Current treatment options in oncology · 2022
    Review
  11. Article
  12. Article
  13. Article
  14. Review
  15. Review
  16. MALDI-2 for the Enhanced Analysis ofAnalytical chemistry · 2020
    Article
  17. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 2 countries.

Bram HeijsCenter for Proteomics and Metabolomics, Leiden University Medical Center, Leiden, The Netherlands. b.p.a.m.heijs@lumc.nl.ORCID http://orcid.org/0000-0001-6328-9305
Stephanie Holst-BernalCenter for Proteomics and Metabolomics, Leiden University Medical Center, Leiden, The Netherlands.
Marieke A de GraaffDepartment of Pathology, Leiden University Medical Center, Leiden, The Netherlands.
Inge H Briaire-de BruijnDepartment of Pathology, Leiden University Medical Center, Leiden, The Netherlands.
Mar Rodriguez-GirondoDepartment of Medical Statistics and Bioinformatics, Leiden University Medical Center, Leiden, The Netherlands.
Michiel A J van de SandeDepartment of Orthopedic Surgery, Leiden University Medical Center, Leiden, The Netherlands.
Manfred WuhrerCenter for Proteomics and Metabolomics, Leiden University Medical Center, Leiden, The Netherlands.ORCID http://orcid.org/0000-0002-0814-4995
Liam A McDonnell *Center for Proteomics and Metabolomics, Leiden University Medical Center, Leiden, The Netherlands.
Judith V M G Bovée *Department of Pathology, Leiden University Medical Center, Leiden, The Netherlands.ORCID http://orcid.org/0000-0003-1155-0481
Leiden University Medical Center · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Myxoid liposarcoma (MLS) is the second most common subtype of liposarcoma, accounting for ~6% of all sarcomas. MLS is characterized by a pathognomonic FUS-DDIT3, or rarely EWSR1-DDIT3, gene fusion. The presence of ≥5% hypercellular round cell areas is associated with a worse prognosis for the patient and is considered high grade. The prognostic significance of areas with moderately increased cellularity (intermediate) is currently unknown. Here we have applied matrix-assisted laser desorption/ionization mass spectrometry imaging to analyze the spatial distribution of N-linked glycans on an MLS microarray in order to identify molecular markers for tumor progression. Comparison of the N-glycan profiles revealed that increased relative abundances of high-mannose type glycans were associated with tumor progression. Concomitantly, an increase of the average number of mannoses on high-mannose glycans was observed. Although overall levels of complex-type glycans decreased, an increase of tri- and tetra-antennary N-glycans was observed with morphological tumor progression and increased tumor histological grade. The high abundance of tri-antennary N-glycan species was also associated with poor disease-specific survival. These findings mirror recent observations in colorectal cancer, breast cancer, ovarian cancer, and cholangiocarcinoma, and are in line with a general role of high-mannose glycans and higher-antennary complex-type glycans in cancer progression.

Indexed as

AdultDisease ProgressionFemaleGene Expression Regulation, NeoplasticHumansKaplan-Meier EstimateLiposarcoma, MyxoidMaleNeoplasm GradingOncogene Proteins, FusionPolysaccharidesRepressor ProteinsSpectrometry, Mass, Matrix-Assisted Laser Desorption-IonizationTandem Mass SpectrometryEWSR1-DDIT3 protein, humanFUS-DDIT3 fusion protein, humanOncogene Proteins, FusionPolysaccharidesRepressor Proteins

Identifiers

PMID32341520
OpenAlexW3018385291

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.