Evidence map›Paper›PMID 32341005›Full record

ArticleStroke and vascular neurology2020

Gene panel for Mendelian strokes.

Fang Fang, Zhe Xu, Yue Suo, Hui Wang, Si Cheng, Hao Li, Wei Li, Yongjun Wang

Open access · goldAbstract readValidation Study
In one paragraph

Article in Stroke and vascular neurology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.2field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 15 citations in OpenAlex.

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  4. Detailed phenotype ofStroke and vascular neurology · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Fang FangMonogenic Disease Research Center for Neurological Disorders, Beijing Tiantan Hospital, Capital Medical University, Beijing, China.ORCID 0000-0001-6481-7034
Zhe XuChina National Clinical Research Center for Neurological Diseases, Beijing, China.
Yue SuoChina National Clinical Research Center for Neurological Diseases, Beijing, China.ORCID 0000-0002-0632-0262
Hui WangMonogenic Disease Research Center for Neurological Disorders, Beijing Tiantan Hospital, Capital Medical University, Beijing, China.
Si ChengChina National Clinical Research Center for Neurological Diseases, Beijing, China.
Hao LiChina National Clinical Research Center for Neurological Diseases, Beijing, China.ORCID 0000-0002-8591-4105
Wei Li *Monogenic Disease Research Center for Neurological Disorders, Beijing Tiantan Hospital, Capital Medical University, Beijing, China lwdoctors@sina.com yongjunwang@ncrcnd.org.cn.
Yongjun Wang *China National Clinical Research Center for Neurological Diseases, Beijing, China lwdoctors@sina.com yongjunwang@ncrcnd.org.cn.ORCID 0000-0002-9976-2341
Capital Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundMendelian stroke causes nearly 7% of ischaemic strokes and is also an important aetiology of cryptogenic stroke. Identifying the genetic abnormalities in Mendelian strokes is important as it would facilitate therapeutic management and genetic counselling. Next-generation sequencing makes large-scale sequencing and genetic testing possible.

methodsA systematic literature search was conducted to identify causal genes of Mendelian strokes, which were used to construct a hybridization-based gene capture panel. Genetic variants for target genes were detected using Illumina HiSeq X10 and the Novaseq platform. The sensitivity and specificity were evaluated by comparing the results with Sanger sequencing.

results53 suspected patients of Mendelian strokes were analysed using the panel of 181 causal genes. According to the American College of Medical Genetics and Genomics standard, 16 likely pathogenic/variants of uncertain significance genetic variants were identified. Diagnostic testing was conducted by comparing the consistency between the results of panel and Sanger sequencing. Both the sensitivity and specificity were 100% for the panel.

conclusionThis panel provides an economical, time-saving and labour-saving method to detect causal mutations of Mendelian strokes.

Indexed as

Gene Expression ProfilingGenetic VariationHigh-Throughput Nucleotide SequencingTranscriptomeGenetic Predisposition to DiseaseHeredityHumansIschemic StrokePedigreePredictive Value of TestsReproducibility of Resultsstroketechnology

Identifiers

PMID32341005
PMCPMC7804056
OpenAlexW3018091666

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.