Evidence map›Paper›PMID 32338761›Full record

ArticleNucleic acids research2020

Phage T7 DNA mimic protein Ocr is a potent inhibitor of BREX defence.

Artem Isaev, Alena Drobiazko, Nicolas Sierro, Julia Gordeeva, Ido Yosef, Udi Qimron, Nikolai V Ivanov, Konstantin Severinov

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 61 papers.

0numbers the graph read from it
0cells of the map it votes in
61citing papers in PubMed
8.3field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

61 citing papers in PubMed, 105 citations in OpenAlex.

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  18. Viral effectors trigger innate immunity across the tree of life.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2025
    Review
  19. Article
  20. Article

1 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 3 countries.

Artem IsaevSkolkovo Institute of Science and Technology, Moscow 143028, Russia.
Alena DrobiazkoSkolkovo Institute of Science and Technology, Moscow 143028, Russia.
Nicolas SierroPhilip Morris International R&D, Philip Morris Products S.A., Neuchatel 2000, Switzerland.
Julia GordeevaSkolkovo Institute of Science and Technology, Moscow 143028, Russia.
Ido YosefDepartment of Clinical Microbiology and Immunology, Sackler Faculty of Medicine, Tel Aviv University, Tel Aviv 69978, Israel.
Udi QimronDepartment of Clinical Microbiology and Immunology, Sackler Faculty of Medicine, Tel Aviv University, Tel Aviv 69978, Israel.
Nikolai V IvanovPhilip Morris International R&D, Philip Morris Products S.A., Neuchatel 2000, Switzerland.
Konstantin SeverinovSkolkovo Institute of Science and Technology, Moscow 143028, Russia.
Skolkovo Institute of Science and Technology · RUPhilip Morris International (Switzerland) · CHTel Aviv University · IL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

BREX (for BacteRiophage EXclusion) is a superfamily of common bacterial and archaeal defence systems active against diverse bacteriophages. While the mechanism of BREX defence is currently unknown, self versus non-self differentiation requires methylation of specific asymmetric sites in host DNA by BrxX (PglX) methyltransferase. Here, we report that T7 bacteriophage Ocr, a DNA mimic protein that protects the phage from the defensive action of type I restriction-modification systems, is also active against BREX. In contrast to the wild-type phage, which is resistant to BREX defence, T7 lacking Ocr is strongly inhibited by BREX, and its ability to overcome the defence could be complemented by Ocr provided in trans. We further show that Ocr physically associates with BrxX methyltransferase. Although BREX+ cells overproducing Ocr have partially methylated BREX sites, their viability is unaffected. The result suggests that, similar to its action against type I R-M systems, Ocr associates with as yet unidentified BREX system complexes containing BrxX and neutralizes their ability to both methylate and exclude incoming phage DNA.

Indexed as

Bacteriophage T7DNA MethylationDNA Modification MethylasesEscherichia coliPlasmidsViral ProteinsDNA Modification MethylasesOcr protein, bacteriophage T7Viral Proteins

Identifiers

PMID32338761
PMCPMC7261183
OpenAlexW3019484961

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.