ArticleJournal of proteome research2020
Longitudinal Transcriptomic, Proteomic, and Metabolomic Analysis of
Open access · greenAbstract read
In one paragraph
Article in Journal of proteome research, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.
0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
5.6field-weighted citation impact, top 5% of its field
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
15 citing papers in PubMed, 32 citations in OpenAlex.
- A Candidatus liberibacter Asiaticus effector, CLIBASIA_00185 controls sugar metabolism, phenylpropanoid biosynthesis, and endocytosis pathway in Citrus sinensis.BMC genomics · 2025Article
- Proteomic insights into fruit-pathogen interactions: managing biotic stress in fruit.Plant cell reports · 2025Review
- "Candidatus Liberibacter asiaticus" Infection Induces Citric Acid Accumulation and Immune Responses Mediated by the Transcription Factor CitPH4.Molecular plant pathology · 2025Article
- Transcriptomic analysis of early stages of 'Frontiers in plant science · 2025Article
- From data to decisions: a paradigm shift in fruit agriculture through the integration of multi-omics, modern phenotyping, and cutting-edge bioinformatic tools.Frontiers in plant science · 2025Review
- Comparative analysis of the PAL gene family in nine citruses provides new insights into the stress resistance mechanism of Citrus species.BMC genomics · 2024Article
- Profiling Plant Proteome and Transcriptome Changes during Grapevine Fanleaf Virus Infection.Journal of proteome research · 2023Article
- Article
- Metabolomics Study at the Postharvest Conditions of Cold Storage and Fungicide (Imazalil Sulfate) Treatment in Navel Oranges and Clementine Mandarins.ACS agricultural science & technology · 2022Article
- An Overview of the Mechanisms Against "Frontiers in microbiology · 2022Review
- Studies on the molecular level changes and potential resistance mechanism ofFrontiers in genetics · 2022Article
- Comparative Proteomic Analysis of Sweet Orange Petiole Provides Insights Into the Development of Huanglongbing Symptoms.Frontiers in plant science · 2021Article
- Transcriptome and Metabolome Comparison of Smooth and RoughFrontiers in plant science · 2021Article
- Bacterial Vector-Borne Plant Diseases: Unanswered Questions and Future Directions.Molecular plant · 2020Review
- Proteomics in Non-model Organisms: A New Analytical Frontier.Journal of proteome research · 2020Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
20 authors at 4 institutions in 1 country.
John S RamseyUSDA Emerging Pests and Pathogens Research Unit, Robert W. Holley Center for Agriculture and Health, 538 Tower Road, Ithaca, New York 14853, United States.ORCID 0000-0003-1439-500X
Elizabeth L ChinDepartment of Food Science and Technology, University of California, 392 Old Davis Road, Davis, California 95616, United States.
Juan D ChavezDepartment of Genome Sciences, University of Washington, William H. Foege Hall, 3720 15th Avenue NE, Seattle, Washington 98195, United States.
Surya SahaBoyce Thompson Institute for Plant Research, 533 Tower Road, Ithaca, New York 14853, United States.
Darya MischukDepartment of Food Science and Technology, University of California, 392 Old Davis Road, Davis, California 95616, United States.
Jaclyn MahoneyBoyce Thompson Institute for Plant Research, 533 Tower Road, Ithaca, New York 14853, United States.
Jared MohrBoyce Thompson Institute for Plant Research, 533 Tower Road, Ithaca, New York 14853, United States.
Faith M RobisonBoyce Thompson Institute for Plant Research, 533 Tower Road, Ithaca, New York 14853, United States.
Elizabeth MitrovicContained Research Facility, University of California, 555 Hopkins Road, Davis, California 95616, United States.
Yimin XuBoyce Thompson Institute for Plant Research, 533 Tower Road, Ithaca, New York 14853, United States.
Susan R StricklerBoyce Thompson Institute for Plant Research, 533 Tower Road, Ithaca, New York 14853, United States.
Noe FernandezBoyce Thompson Institute for Plant Research, 533 Tower Road, Ithaca, New York 14853, United States.
Xuefei ZhongDepartment of Genome Sciences, University of Washington, William H. Foege Hall, 3720 15th Avenue NE, Seattle, Washington 98195, United States.
MaryLou PolekCitrus Research Board, 217 N Encina Street, Visalia, California 93291, United States.
Kris E GodfreyContained Research Facility, University of California, 555 Hopkins Road, Davis, California 95616, United States.
James J GiovannoniBoyce Thompson Institute for Plant Research, 533 Tower Road, Ithaca, New York 14853, United States.
Lukas A MuellerBoyce Thompson Institute for Plant Research, 533 Tower Road, Ithaca, New York 14853, United States.
Carolyn M SlupskyDepartment of Food Science and Technology, University of California, 392 Old Davis Road, Davis, California 95616, United States.ORCID 0000-0002-5100-1594
James E BruceDepartment of Genome Sciences, University of Washington, William H. Foege Hall, 3720 15th Avenue NE, Seattle, Washington 98195, United States.ORCID 0000-0001-6441-6089
Michelle HeckUSDA Emerging Pests and Pathogens Research Unit, Robert W. Holley Center for Agriculture and Health, 538 Tower Road, Ithaca, New York 14853, United States.ORCID 0000-0003-0921-4489
Cornell University · USUniversity of California, Davis · USUniversity of Washington · USNational Clonal Germplasm Repository for Citrus · US
Funding
Quantitation of protein interactions in cancer cellsR01GM086688 · NIGMS · UNIVERSITY OF WASHINGTON · PI BRUCE, JAMES EDWARD · 2009 to 2019
$4.2MDynamics of the cellular interactomeR35GM136255 · NIGMS · UNIVERSITY OF WASHINGTON · PI James Edward Bruce · 2020 to 2026
$4.0MThe heart failure interactomeR01HL144778 · NHLBI · UNIVERSITY OF WASHINGTON · PI BRUCE, JAMES EDWARD · 2019 to 2022
$2.7MACQUISITION OF 500 MHZ NMR SPECTROMETERS10RR011973 · NCRR · UNIVERSITY OF CALIFORNIA DAVIS · PI LA MAR, GERD N · 1997 to 1997
–NCRR NIH HHS S10 RR011973NHLBI NIH HHS R01 HL144778NIGMS NIH HHS R01 GM086688NIGMS NIH HHS R35 GM136255
Abstract
Presymptomatic detection of citrus trees infected with
Indexed as
CitrusHemipteraRhizobiaceaeAnimalsLiberibacterPlant DiseasesProteomicsTranscriptomeCandidatus Liberibacter asiaticuscitrus greening diseasehuanglongbingmass spectrometrymetabolomicsproteomicsproton nuclear magnetic resonanceRNA-seqtranscriptomics
Identifiers
What OpenQuestion holds
Textmetadata
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Read underepoch 390
Registered trials
None linked
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.