Evidence map›Paper›PMID 32338276›Full record

ArticleEmerging topics in life sciences2020

Coordination of transcription, processing, and export of highly expressed RNAs by distinct biomolecular condensates.

Alexander M Ishov, Aishwarya Gurumurthy, Jörg Bungert

Open access · hybridAbstract read
In one paragraph

Article in Emerging topics in life sciences, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 17 citations in OpenAlex.

  1. Review
  2. Super-enhancer omics in stem cell.Molecular cancer · 2024
    Review
  3. Review
  4. Article
  5. DHX36 maintains genomic integrity by unwinding G-quadruplexes.Genes to cells : devoted to molecular & cellular mechanisms · 2023
    Article
  6. Disrupting pathologic phase transitions in neurodegeneration.The Journal of clinical investigation · 2023
    Review
  7. Review
  8. Article
  9. Enhancer-Mediated Formation of Nuclear Transcription Initiation Domains.International journal of molecular sciences · 2022
    Review
  10. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Alexander M IshovDepartment of Anatomy and Cell Biology, University of Florida, Gainesville, FL 32610, U.S.A.
Aishwarya GurumurthyDepartment of Biochemistry and Molecular Biology, Genetics Institute, Powell Gene Therapy Center, College of Medicine, University of Florida, Gainesville, FL 32610, U.S.A.
Jörg BungertUF Health Cancer Center, University of Florida, Gainesville, FL 32610, U.S.A.
University of Florida Health · USUniversity of Florida · US

Funding

The Role of H3.3 histone variant in the pathogenesis of oral Kaposi's SarcomaR01DE026707 · NIDCR · UNIVERSITY OF FLORIDA · PI RENNE, ROLF F · 2018 to 2022
$1.8M
Functions of histone variants in castration-resistance prostate cancerR21CA198820 · NCI · UNIVERSITY OF FLORIDA · PI ISHOV, ALEXANDER M · 2016 to 2017
$359k
Functional proteomic and genomic analysis of transcription factor TFII-I in erythroid cellsR56DK111439 · NIDDK · UNIVERSITY OF FLORIDA · PI BUNGERT, JORG · 2018 to 2018
$100k
NCI NIH HHS R21 CA198820NIDCR NIH HHS R01 DE026707NIDDK NIH HHS R56 DK111439
6 · The paper itself

Abstract

Genes under control of super-enhancers are expressed at extremely high levels and are frequently associated with nuclear speckles. Recent data suggest that the high concentration of unphosphorylated RNA polymerase II (Pol II) and Mediator recruited to super-enhancers create phase-separated condensates. Transcription initiates within or at the surface of these phase-separated droplets and the phosphorylation of Pol II, associated with transcription initiation and elongation, dissociates Pol II from these domains leading to engagement with nuclear speckles, which are enriched with RNA processing factors. The transitioning of Pol II from transcription initiation domains to RNA processing domains effectively co-ordinates transcription and processing of highly expressed RNAs which are then rapidly exported into the cytoplasm.

Indexed as

RNA Polymerase IITranscription, GeneticPhosphorylationRNA Polymerase IInuclear pore complexnuclear specklesphase separationRNA processingsuper-enhancertranscription

Identifiers

PMID32338276
PMCPMC7733674
OpenAlexW3020016108

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.