Evidence map›Paper›PMID 32338184›Full record

ArticleRNA biology2020

The RNA degradome: a precious resource for deciphering RNA processing and regulation codes in plants.

Xiaoxia Ma, Xiaopu Yin, Zhonghai Tang, Hidetaka Ito, Chaogang Shao, Yijun Meng, Tian Xie

Open access · bronzeAbstract read
In one paragraph

Article in RNA biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.2field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 14 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Xiaoxia MaHangzhou Normal University , Hangzhou, China.
Xiaopu YinHangzhou Normal University , Hangzhou, China.ORCID 0000-0002-7063-4397
Zhonghai TangCollege of Food Science and Technology, Hunan Agricultural University , Changsha, Hunan, PR China.
Hidetaka ItoFaculty of Science, Hokkaido University , Sapporo, Japan.
Chaogang ShaoCollege of Life Sciences, Huzhou University , Huzhou, PR China.
Yijun MengHangzhou Normal University , Hangzhou, China.
Tian XieHangzhou Normal University , Hangzhou, China.
Hangzhou Normal University · CNHokkaido University of Science · JPHunan Agricultural University · CNHuzhou University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The plant RNA degradome was defined as an aggregate of the RNA fragments degraded from various biochemical pathways, such as RNA turnover, maturation and quality surveillance. In recent years, the degradome sequencing (degradome-seq) libraries became a rich storehouse for researchers to study on RNA processing and regulation. Here, we provided a brief overview of the uses of degradome-seq data in plant RNA biology, especially on non-coding RNA processing and small RNA-guided target cleavages. Some novel applications in RNA research area, such as

Indexed as

Gene Expression Regulation, PlantRNA StabilityComputational BiologyDatabases, GeneticHigh-Throughput Nucleotide SequencingMicroRNAsPlantsRNA, PlantRNA Processing, Post-TranscriptionalMicroRNAsRNA, Plantgene differential expression (GDE)Plant RNA degradomepost-transcriptionalRNA processingsmall RNA (sRNA)-guided target cleavagestranscriptional

Identifiers

PMID32338184
PMCPMC7549650
OpenAlexW3019883241

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.