Evidence map›Paper›PMID 32335744›Full record

ArticleHistochemistry and cell biology2020

Influence of protein (human galectin-3) design on aspects of lectin activity.

Gabriel García Caballero, Donella Beckwith, Nadezhda V Shilova, Adele Gabba, Tanja J Kutzner, Anna-Kristin Ludwig, Joachim C Manning, Herbert Kaltner, Fred Sinowatz, Mare Cudic and 3 more

Erratum issuedOpen access · hybridAbstract read
In one paragraph

Article in Histochemistry and cell biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.5field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 26 citations in OpenAlex.

  1. Review
  2. Article
  3. What is the Sugar Code?Chembiochem : a European journal of chemical biology · 2022
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  13. In focus in HCB.Histochemistry and cell biology · 2020
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 4 countries.

Gabriel García CaballeroInstitut für Physiologische Chemie, Tierärztliche Fakultät, Ludwig-Maximilians-Universität München, 80539, München, Germany.
Donella BeckwithDepartment of Chemistry and Biochemistry, Florida Atlantic University, Boca Raton, FL, 33431, USA.
Nadezhda V ShilovaShemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Laboratory of Carbohydrates, Moscow, Russia, 117997.
Adele GabbaSchool of Chemistry, National University of Ireland, Galway, Ireland.
Tanja J KutznerInstitut für Physiologische Chemie, Tierärztliche Fakultät, Ludwig-Maximilians-Universität München, 80539, München, Germany.
Anna-Kristin LudwigInstitut für Physiologische Chemie, Tierärztliche Fakultät, Ludwig-Maximilians-Universität München, 80539, München, Germany.
Joachim C ManningInstitut für Physiologische Chemie, Tierärztliche Fakultät, Ludwig-Maximilians-Universität München, 80539, München, Germany.
Herbert KaltnerInstitut für Physiologische Chemie, Tierärztliche Fakultät, Ludwig-Maximilians-Universität München, 80539, München, Germany.
Fred SinowatzInstitut für Anatomie, Histologie und Embryologie, Tierärztliche Fakultät, Ludwig-Maximilians-Universität München, 80539, München, Germany.
Mare CudicDepartment of Chemistry and Biochemistry, Florida Atlantic University, Boca Raton, FL, 33431, USA. mcudic@fau.edu.
Nicolai V BovinShemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Laboratory of Carbohydrates, Moscow, Russia, 117997. professorbovin@yandex.ru.
Paul V MurphySchool of Chemistry, National University of Ireland, Galway, Ireland. paul.v.murphy@nuigalway.ie.
Hans-Joachim GabiusInstitut für Physiologische Chemie, Tierärztliche Fakultät, Ludwig-Maximilians-Universität München, 80539, München, Germany. gabius@tiph.vetmed.uni-muenchen.de.
Ludwig-Maximilians-Universität München · DEFlorida Atlantic University · USInstitute of Bioorganic Chemistry · RUOllscoil na Gaillimhe – University of Galway · IE

Funding

Mechanistic insight into tumor-associated MUC1 glycopeptides binding to macrophage galactose-type lectinR15CA242351 · NCI · FLORIDA ATLANTIC UNIVERSITY · PI CUDIC, MARE · 2019 to 2024
$878k
NCI NIH HHS R15 CA242351NIH HHS CA242351
6 · The paper itself

Abstract

The concept of biomedical significance of the functional pairing between tissue lectins and their glycoconjugate counterreceptors has reached the mainstream of research on the flow of biological information. A major challenge now is to identify the principles of structure-activity relationships that underlie specificity of recognition and the ensuing post-binding processes. Toward this end, we focus on a distinct feature on the side of the lectin, i.e. its architecture to present the carbohydrate recognition domain (CRD). Working with a multifunctional human lectin, i.e. galectin-3, as model, its CRD is used in protein engineering to build variants with different modular assembly. Hereby, it becomes possible to compare activity features of the natural design, i.e. CRD attached to an N-terminal tail, with those of homo- and heterodimers and the tail-free protein. Thermodynamics of binding disaccharides proved full activity of all proteins at very similar affinity. The following glycan array testing revealed maintained preferential contact formation with N-acetyllactosamine oligomers and histo-blood group ABH epitopes irrespective of variant design. The study of carbohydrate-inhibitable binding of the test panel disclosed up to qualitative cell-type-dependent differences in sections of fixed murine epididymis and especially jejunum. By probing topological aspects of binding, the susceptibility to inhibition by a tetravalent glycocluster was markedly different for the wild-type vs the homodimeric variant proteins. The results teach the salient lesson that protein design matters: the type of CRD presentation can have a profound bearing on whether basically suited oligosaccharides, which for example tested positively in an array, will become binding partners in situ. When lectin-glycoconjugate aggregates (lattices) are formed, their structural organization will depend on this parameter. Further testing (ga)lectin variants will thus be instrumental (i) to define the full range of impact of altering protein assembly and (ii) to explain why certain types of design have been favored during the course of evolution, besides opening biomedical perspectives for potential applications of the novel galectin forms.

Indexed as

AnimalsBlood ProteinsGalectin 3GalectinsGlycoconjugatesHumansMiceMice, Inbred C57BLProtein Array AnalysisProtein EngineeringThermodynamicsBlood ProteinsGalectin 3GalectinsGlycoconjugatesLGALS3 protein, humanEnterocytesGlycoclusterGlycoproteinLectin (engineering)Thermodynamics

Identifiers

PMID32335744
PMCPMC7429544
OpenAlexW3018175226

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.