Evidence map›Paper›PMID 32333827›Full record

ArticleFEBS open bio2020

Extended in vitro culture of primary human mesenchymal stem cells downregulates Brca1-related genes and impairs DNA double-strand break recognition.

Xuanwen Bao, Jing Wang, Guangming Zhou, Attila Aszodi, Veronika Schönitzer, Harry Scherthan, Michael J Atkinson, Michael Rosemann

Open access · goldAbstract read
In one paragraph

Article in FEBS open bio, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.5field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
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  10. Role ofFrontiers in cell and developmental biology · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Xuanwen BaoInstitute of Radiation Biology, Helmholtz Center Munich - German Research Center for Environmental Health, Neuherberg, Germany.ORCID 0000-0002-6232-3783
Jing WangInstitute of Radiation Biology, Helmholtz Center Munich - German Research Center for Environmental Health, Neuherberg, Germany.
Guangming ZhouState Key Laboratory of Radiation Medicine and Protection, School of Radiation Medicine and Protection, Medical College of Soochow University, Suzhou, China.
Attila AszodiLaboratory of Experimental Surgery and Regenerative Medicine, Clinic for General, Trauma and Reconstructive Surgery, Ludwig-Maximilians-University, Munich, Germany.
Veronika SchönitzerLaboratory of Experimental Surgery and Regenerative Medicine, Clinic for General, Trauma and Reconstructive Surgery, Ludwig-Maximilians-University, Munich, Germany.
Harry ScherthanBundeswehr Institute of Radiobiology, Affiliated to the University of Ulm, Munich, Germany.
Michael J AtkinsonInstitute of Radiation Biology, Helmholtz Center Munich - German Research Center for Environmental Health, Neuherberg, Germany.
Michael RosemannInstitute of Radiation Biology, Helmholtz Center Munich - German Research Center for Environmental Health, Neuherberg, Germany.ORCID 0000-0002-5855-065X
Helmholtz Zentrum München · DELudwig-Maximilians-Universität München · DESoochow University · CNUniversität Ulm · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mesenchymal stem cells (MSCs) are multilineage adult stem cells with considerable potential for cell-based regenerative therapies. In vitro expansion changes their epigenetic and cellular properties, with a poorly understood impact on DNA damage response (DDR) and genome stability. We report here results of a transcriptome-based pathway analysis of in vitro-expanded human bone marrow-derived mesenchymal stem cell (hBM-MSCs), supplemented with cellular assays focusing on DNA double-strand break (DSB) repair. Gene pathways affected by in vitro aging were mapped using gene ontology, KEGG, and GSEA, and were found to involve DNA repair, homologous recombination (HR), cell cycle control, and chromosomal replication. Assays for the recognition (γ-H2AX + 53BP1 foci) and repair (pBRCA1 + γ-H2AX foci) of X-ray-induced DNA DSBs in hBM-MSCs show that over a period of 8 weeks of in vitro aging (i.e., about 10 doubling times), cells exhibit a reduced DDR and a higher fraction of residual DNA damage. Furthermore, a distinct subpopulation of cells with impaired DNA DSB recognition was observed. Several genes that participate in DNA repair by HR (e.g., Rad51, Rad54, BRCA1) show a 2.3- to fourfold reduction of their mRNA expression by qRT-PCR. We conclude that the in vitro expansion of hMSCs can lead to aging-related impairment of the recognition and repair of DNA breaks.

Indexed as

Down-RegulationBRCA1 ProteinCells, CulturedDNA-Binding ProteinsDNA Breaks, Double-StrandedDNA HelicasesHumansMesenchymal Stem CellsRad51 RecombinaseRNA, MessengerBRCA1 ProteinBRCA1 protein, humanDNA-Binding ProteinsDNA HelicasesRAD51 protein, humanRad51 RecombinaseRAD54L protein, humanRNA, MessengerBRCA1cellular agingDNA repairhomologous recombinationmesenchymal stem cells

Identifiers

PMID32333827
PMCPMC7327915
OpenAlexW3020664473

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.