Evidence map›Paper›PMID 32330354›Full record

ArticleChemphyschem : a European journal of chemical physics and physical chemistry2020

In situ Surface Charge Density Visualization of Self-assembled DNA Nanostructures after Ion Exchange.

Steffan Møller Sønderskov, Lasse Hyldgaard Klausen, Sebastian Amland Skaanvik, Xiaojun Han, Mingdong Dong

Open access · hybridAbstract read
In one paragraph

Article in Chemphyschem : a European journal of chemical physics and physical chemistry, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Scanning Ion Conductance Microscopy.Chemical reviews · 2021
    Review
  7. Article
  8. In situ Surface Charge Density Visualization of Self-assembled DNA Nanostructures after Ion Exchange.Chemphyschem : a European journal of chemical physics and physical chemistry · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 3 countries.

Steffan Møller SønderskovInterdisciplinary Nanoscience Center (iNANO), Aarhus University, Denmark.
Lasse Hyldgaard KlausenInterdisciplinary Nanoscience Center (iNANO), Aarhus University, Denmark.
Sebastian Amland SkaanvikInterdisciplinary Nanoscience Center (iNANO), Aarhus University, Denmark.
Xiaojun HanState Key Laboratory of Urban Water Resource and Environment, School of Chemistry and Chemical Engineering, Harbin Institute of Technology, China.
Mingdong DongInterdisciplinary Nanoscience Center (iNANO), Aarhus University, Denmark.ORCID 0000-0002-2025-2171
Aarhus University · DKHarbin Institute of Technology · CN

Funding

Carlsberg FoundationDanish Council for Independent Research 6108-00396BDanish Council for Independent Research EU H2020Fundamental Research Funds for the Central Universities, China YJ201893Marie Sklodowska-Curie Actions MNR4SCELL no. 734174Marie Sklodowska-Curie Actions SENTINEL no. 812398Sichuan Science and Technology Foundation 20YYJC3895Sino-Danish Center for Education and Research,State Key Lab of Advanced Metals and Materials, China 2019-Z03the National Natural Science Foundation of China 21773050the National Natural Science Foundation of China 21929401
6 · The paper itself

Abstract

The charge density of DNA is a key parameter in strand hybridization and for the interactions occurring between DNA and molecules in biological systems. Due to the intricate structure of DNA, visualization of the surface charge density of DNA nanostructures under physiological conditions was not previously possible. Here, we perform a simultaneous analysis of the topography and surface charge density of DNA nanostructures using atomic force microscopy and scanning ion conductance microscopy. The effect of in situ ion exchange using various alkali metal ions is tested with respect to the adsorption of DNA origami onto mica, and a quantitative study of surface charge density reveals ion exchange phenomena in mica as a key parameter in DNA adsorption. This is important for structure-function studies of DNA nanostructures. The research provides an efficient approach to study surface charge density of DNA origami nanostructures and other biological molecules at a single molecule level.

Indexed as

AdsorptionAluminum SilicatesDNAIon ExchangeMicroscopy, Atomic ForceNanostructuresNucleic Acid ConformationStatic ElectricityAluminum SilicatesDNAmicaadsorptionDNA origamiscanning ion conductance microscopyscanning probe microscopysurface charge density

Identifiers

PMID32330354
PMCPMC7891384
OpenAlexW3019104176

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.