Evidence map›Paper›PMID 32330041›Full record

ArticleThe journal of physical chemistry letters2020

Excited-State Vibronic Dynamics of Bacteriorhodopsin from Two-Dimensional Electronic Photon Echo Spectroscopy and Multiconfigurational Quantum Chemistry.

Samer Gozem, Philip J M Johnson, Alexei Halpin, Hoi Ling Luk, Takefumi Morizumi, Valentyn I Prokhorenko, Oliver P Ernst, Massimo Olivucci, R J Dwayne Miller

Open access · greenAbstract read
In one paragraph

Article in The journal of physical chemistry letters, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.7field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 33 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Journal of chemical theory and computation · 2025
    Article
  5. Article
  6. Ultrafast terahertz Stark spectroscopy reveals the excited-state dipole moments of retinal in bacteriorhodopsin.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 4 countries.

Samer GozemDepartment of Chemistry, Bowling Green State University, Bowling Green, Ohio 43403, United States.ORCID http://orcid.org/0000-0002-6429-2853
Philip J M JohnsonDepartment of Chemistry, University of Toronto, Toronto, Ontario M5S 3H6, Canada.ORCID http://orcid.org/0000-0002-7251-4815
Alexei HalpinDepartment of Chemistry, University of Toronto, Toronto, Ontario M5S 3H6, Canada.
Hoi Ling LukDepartment of Chemistry, Bowling Green State University, Bowling Green, Ohio 43403, United States.
Takefumi MorizumiDepartment of Biochemistry, University of Toronto, Toronto, Ontario M5S 1A8, Canada.
Valentyn I ProkhorenkoMax Planck Institute for the Structure and Dynamics of Matter, Atomically Resolved Dynamics Division, Building 99 (CFEL), Luruper Chaussee 149, 22761 Hamburg, Germany.
Oliver P ErnstDepartment of Biochemistry, University of Toronto, Toronto, Ontario M5S 1A8, Canada.ORCID http://orcid.org/0000-0002-8863-9444
Massimo OlivucciDepartment of Chemistry, Bowling Green State University, Bowling Green, Ohio 43403, United States.ORCID http://orcid.org/0000-0002-8247-209X
R J Dwayne MillerDepartment of Chemistry, University of Toronto, Toronto, Ontario M5S 3H6, Canada.ORCID http://orcid.org/0000-0003-0884-0541
University of Toronto · CABowling Green State University · USUniversität Hamburg · DEUniversity of Siena · IT

Funding

Computational Design of Highly Fluorescent RhodopsinsR15GM126627 · NIGMS · BOWLING GREEN STATE UNIVERSITY · PI OLIVUCCI, MASSIMO · 2018 to 2018
$337k
NIGMS NIH HHS R15 GM126627
6 · The paper itself

Abstract

Owing to the ultrafast time scale of the photoinduced reaction and high degree of spectral overlap among the reactant, product, and excited electronic states in bacteriorhodopsin (bR), it has been a challenge for traditional spectroscopies to resolve the interplay between vibrational dynamics and electronic processes occurring in the retinal chromophore of bR. Here, we employ ultrafast two-dimensional electronic photon echo spectroscopy to follow the early excited-state dynamics of bR preceding the isomerization. We detect an early periodic photoinduced absorptive signal that, employing a hybrid multiconfigurational quantum/molecular mechanical model of bR, we attribute to periodic mixing of the first and second electronic excited states (S

Indexed as

Quantum TheoryBacteriorhodopsinsMolecular StructurePhotoelectron SpectroscopyBacteriorhodopsins

Identifiers

PMID32330041
PMCPMC9198827
OpenAlexW3018469617

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.