Evidence map›Paper›PMID 32329086›Full record

ArticlePlant, cell & environment2020

The res (restored cell structure by salinity) tomato mutant reveals the role of the DEAD-box RNA helicase SlDEAD39 in plant development and salt response.

Carmen Capel, Irene Albaladejo, Isabel Egea, Isabel L Massaretto, Fernando J Yuste-Lisbona, Benito Pineda, Begoña García-Sogo, Trinidad Angosto, Francisco B Flores, Vicente Moreno and 3 more

Open access · hybridAbstract read
In one paragraph

Article in Plant, cell & environment, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 20 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Article
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  7. Article
  8. Functions and mechanisms of RNA helicases in plants.Journal of experimental botany · 2023
    Review
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 2 countries.

Carmen CapelCentro de Investigación en Biotecnología Agroalimentaria (BITAL), Universidad de Almería, Almería, Spain.
Irene AlbaladejoCentro de Edafología y Biología Aplicada del Segura (CEBAS-CSIC), Campus Universitario de Espinardo, Espinardo-Murcia, Spain.
Isabel EgeaCentro de Edafología y Biología Aplicada del Segura (CEBAS-CSIC), Campus Universitario de Espinardo, Espinardo-Murcia, Spain.
Isabel L MassarettoDepartment of Food Science and Experimental Nutrition, School of Pharmaceutical Sciences, Food Research Center (FoRC-CEPID), University of São Paulo, São Paulo, Brazil.
Fernando J Yuste-LisbonaCentro de Investigación en Biotecnología Agroalimentaria (BITAL), Universidad de Almería, Almería, Spain.
Benito PinedaInstituto de Biología Molecular y Celular de Plantas (IBMCP-UPV/CSIC), Universidad Politécnica de Valencia, Valencia, Spain.
Begoña García-SogoInstituto de Biología Molecular y Celular de Plantas (IBMCP-UPV/CSIC), Universidad Politécnica de Valencia, Valencia, Spain.
Trinidad AngostoCentro de Investigación en Biotecnología Agroalimentaria (BITAL), Universidad de Almería, Almería, Spain.
Francisco B FloresCentro de Edafología y Biología Aplicada del Segura (CEBAS-CSIC), Campus Universitario de Espinardo, Espinardo-Murcia, Spain.
Vicente MorenoInstituto de Biología Molecular y Celular de Plantas (IBMCP-UPV/CSIC), Universidad Politécnica de Valencia, Valencia, Spain.
Rafael LozanoCentro de Investigación en Biotecnología Agroalimentaria (BITAL), Universidad de Almería, Almería, Spain.
María C BolarínCentro de Edafología y Biología Aplicada del Segura (CEBAS-CSIC), Campus Universitario de Espinardo, Espinardo-Murcia, Spain.
Juan CapelCentro de Investigación en Biotecnología Agroalimentaria (BITAL), Universidad de Almería, Almería, Spain.ORCID 0000-0002-4327-0604
University of Almería · ESCentro de Edafología y Biología Aplicada del Segura · ESInstituto de Biología Molecular y Celular de Plantas · ESUniversidade de São Paulo · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Increasing evidences highlight the importance of DEAD-box RNA helicases in plant development and stress responses. In a previous study, we characterized the tomato res mutant (restored cell structure by salinity), showing chlorosis and development alterations that reverted under salt-stress conditions. Map-based cloning demonstrates that RES gene encodes SlDEAD39, a chloroplast-targeted DEAD-box RNA helicase. Constitutive expression of SlDEAD39 complements the res mutation, while the silencing lines had a similar phenotype than res mutant, which is also reverted under salinity. Functional analysis of res mutant proved SlDEAD39 is involved in the in vivo processing of the chloroplast, 23S rRNA, at the hidden break-B site, a feature also supported by in vitro binding experiments of the protein. In addition, our results show that other genes coding for chloroplast-targeted DEAD-box proteins are induced by salt-stress, which might explain the rescue of the res mutant phenotype. Interestingly, salinity restored the phenotype of res adult plants by increasing their sugar content and fruit yield. Together, these results propose an unprecedented role of a DEAD-box RNA helicase in regulating plant development and stress response through the proper ribosome and chloroplast functioning, which, in turn, represents a potential target to improve salt tolerance in tomato crops.

Indexed as

Blotting, NorthernChloroplastsDEAD-box RNA HelicasesGene Expression Regulation, PlantPlant ProteinsPlants, Genetically ModifiedReal-Time Polymerase Chain ReactionSalt StressSolanum lycopersicumDEAD-box RNA HelicasesPlant Proteinschloroplast-targeted DEAD-box RNA helicasesfruit yieldplant developmentrRNA processingsalt stress responseSolanum lycopersicumtomato

Identifiers

PMID32329086
PMCPMC7384196
OpenAlexW3018845844

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.