Evidence map›Paper›PMID 32328429›Full record

ArticleAdvanced science (Weinheim, Baden-Wurttemberg, Germany)2020

Dissolvable Polyacrylamide Beads for High-Throughput Droplet DNA Barcoding.

Yongcheng Wang, Ting Cao, Jina Ko, Yinan Shen, Will Zong, Kuanwei Sheng, Wenjian Cao, Sijie Sun, Liheng Cai, Ying-Lin Zhou and 4 more

Open access · goldAbstract read
In one paragraph

Article in Advanced science (Weinheim, Baden-Wurttemberg, Germany), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 53 citations in OpenAlex.

  1. Article
  2. Article
  3. Single-Cell Nucleus Extraction with Cellular Indexing.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2025
    Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Processing DNA Storage through Programmable Assembly in a Droplet-Based Fluidics System.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2023
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Highly sensitive single-cell chromatin accessibility assay and transcriptome coassay with METATAC.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Dissolvable Polyacrylamide Beads for High-Throughput Droplet DNA Barcoding.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 2 countries.

Yongcheng WangWyss Institute for Biologically Inspired Engineering Harvard University Boston MA 02115 USA.ORCID https://orcid.org/0000-0003-2820-4243
Ting CaoWyss Institute for Biologically Inspired Engineering Harvard University Boston MA 02115 USA.
Jina KoWyss Institute for Biologically Inspired Engineering Harvard University Boston MA 02115 USA.
Yinan ShenJohn A. Paulson School of Engineering and Applied Sciences and Department of Physics Harvard University Cambridge MA 02138 USA.
Will ZongJohn A. Paulson School of Engineering and Applied Sciences and Department of Physics Harvard University Cambridge MA 02138 USA.
Kuanwei ShengDepartment of Molecular and Human Genetics Baylor College of Medicine Houston TX 77030 USA.
Wenjian CaoDepartment of Molecular and Human Genetics Baylor College of Medicine Houston TX 77030 USA.
Sijie SunJohn A. Paulson School of Engineering and Applied Sciences and Department of Physics Harvard University Cambridge MA 02138 USA.
Liheng CaiJohn A. Paulson School of Engineering and Applied Sciences and Department of Physics Harvard University Cambridge MA 02138 USA.
Ying-Lin ZhouBeijing National Laboratory for Molecular Sciences (BNLMS) MOE Key Laboratory of Bioorganic Chemistry and Molecular Engineering College of Chemistry and Molecular Engineering Peking University Beijing 100871 China.
Xin-Xiang ZhangBeijing National Laboratory for Molecular Sciences (BNLMS) MOE Key Laboratory of Bioorganic Chemistry and Molecular Engineering College of Chemistry and Molecular Engineering Peking University Beijing 100871 China.
Chenghang ZongDepartment of Molecular and Human Genetics Baylor College of Medicine Houston TX 77030 USA.
Ralph WeisslederCenter for Systems Biology Massachusetts General Hospital Harvard Medical School Boston MA 02114 USA.
David WeitzWyss Institute for Biologically Inspired Engineering Harvard University Boston MA 02115 USA.
Harvard University · USBaylor College of Medicine · USPeking University · CN

Funding

Single Circulating Vesicle Analysis for Early Cancer DetectionR21CA236561 · NCI · MASSACHUSETTS GENERAL HOSPITAL · PI WEISSLEDER, MD, PHD, RALPH · 2019 to 2021
$585k
NCI NIH HHS R21 CA236561
6 · The paper itself

Abstract

Droplet-based single cell sequencing technologies, such as inDrop, Drop-seq, and 10X Genomics, are catalyzing a revolution in the understanding of biology. Barcoding beads are key components for these technologies. What is limiting today are barcoding beads that are easy to fabricate, can efficiently deliver primers into drops, and thus achieve high detection efficiency. Here, this work reports an approach to fabricate dissolvable polyacrylamide beads, by crosslinking acrylamide with disulfide bridges that can be cleaved with dithiothreitol. The beads can be rapidly dissolved in drops and release DNA barcode primers. The dissolvable beads are easy to synthesize, and the primer cost for the beads is significantly lower than that for the previous barcoding beads. Furthermore, the dissolvable beads can be loaded into drops with >95% loading efficiency of a single bead per drop and the dissolution of beads does not influence reverse transcription or the polymerase chain reaction (PCR) in drops. Based on this approach, the dissolvable beads are used for single cell RNA and protein analysis.

Indexed as

barcode beadsdissolvable hydrogelsdroplet microfluidicssingle‐cell sequencing

Identifiers

PMID32328429
PMCPMC7175265
OpenAlexW3007500741

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.