Evidence map›Paper›PMID 32327664›Full record

ArticleNature communications2020

Arabidopsis FHY3 and FAR1 integrate light and strigolactone signaling to regulate branching.

Yurong Xie, Yang Liu, Mengdi Ma, Qin Zhou, Yongping Zhao, Binbin Zhao, Baobao Wang, Hongbin Wei, Haiyang Wang

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 90 papers.

0numbers the graph read from it
0cells of the map it votes in
90citing papers in PubMed
19.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

90 citing papers in PubMed, 162 citations in OpenAlex.

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30 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Yurong XieBiotechnology Research Institute, Chinese Academy of Agricultural Sciences, 100081, Beijing, China.ORCID http://orcid.org/0000-0001-6476-2467
Yang LiuBiotechnology Research Institute, Chinese Academy of Agricultural Sciences, 100081, Beijing, China.
Mengdi MaBiotechnology Research Institute, Chinese Academy of Agricultural Sciences, 100081, Beijing, China.
Qin ZhouGraduate School of Chinese Academy of Agricultural Sciences, 100081, Beijing, China.
Yongping ZhaoGraduate School of Chinese Academy of Agricultural Sciences, 100081, Beijing, China.
Binbin ZhaoGraduate School of Chinese Academy of Agricultural Sciences, 100081, Beijing, China.
Baobao WangBiotechnology Research Institute, Chinese Academy of Agricultural Sciences, 100081, Beijing, China.
Hongbin WeiState Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources, South China Agricultural University, 510642, Guangzhou, China.
Haiyang WangState Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources, South China Agricultural University, 510642, Guangzhou, China. whyang@scau.edu.cn.ORCID http://orcid.org/0000-0002-1302-5747
Chinese Academy of Agricultural Sciences · CNSouth China Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Branching/tillering is an important parameter of plant architecture and is tightly regulated by both internal factors (such as plant hormones) and external factors (such as light conditions). How the various signaling pathways converge to coordinately regulate branching is not well understood. Here, we report that in Arabidopsis, FHY3 and FAR1, two homologous transcription factors essential for phytochrome A-mediated light signaling, and SMXL6/SMXL7/SMXL8, three key repressors of the strigolactone (SL) signaling pathway, directly interact with SPL9 and SPL15 and suppress their transcriptional activation of BRC1, a key repressor of branching, thus promoting branching. In addition, FHY3 and FAR1 also directly up-regulate the expression of SMXL6 and SMXL7 to promote branching. Simulated shade treatment reduces the accumulation of FHY3 protein, leading to increased expression of BRC1 and reduced branching. Our results establish an integrated model of light and SL coordinately regulating BRC1 expression and branching through converging at the BRC1 promoter.

Indexed as

Signal TransductionArabidopsisArabidopsis ProteinsGene Expression Regulation, PlantHeterocyclic Compounds, 3-RingLactonesLightLight Signal TransductionMutationNuclear ProteinsPhytochromePlants, Genetically ModifiedPromoter Regions, GeneticProtein BindingRepressor ProteinsTrans-ActivatorsArabidopsis ProteinsBRC1 protein, ArabidopsisFAR1 protein, ArabidopsisFHY3 protein, ArabidopsisGR24 strigolactoneHeterocyclic Compounds, 3-RingLactonesNuclear ProteinsPhytochromeRepressor ProteinsSPL15 protein, ArabidopsisSPL9 protein, ArabidopsisTrans-ActivatorsTranscription Factors

Identifiers

PMID32327664
PMCPMC7181604
OpenAlexW3019498562

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.