Evidence map›Paper›PMID 32327659›Full record

ArticleNature communications2020

Deletion of Topoisomerase 1 in excitatory neurons causes genomic instability and early onset neurodegeneration.

Giulia Fragola, Angela M Mabb, Bonnie Taylor-Blake, Jesse K Niehaus, William D Chronister, Hanqian Mao, Jeremy M Simon, Hong Yuan, Zibo Li, Michael J McConnell and 1 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
1.8field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 38 citations in OpenAlex.

  1. Article
  2. Article
  3. DNA topological regulation in RNA polymerase II transcription.Cellular & molecular biology letters · 2026
    Review
  4. The Roles of Topoisomerases in Transcriptional Regulation.International journal of molecular sciences · 2026
    Review
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Review
  12. Article
  13. Review
  14. Article
  15. Topoisomerases in Immune Cell Development and Function.Journal of immunology (Baltimore, Md. : 1950) · 2023
    Review
  16. Article
  17. Review
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Giulia FragolaDepartment of Cell Biology and Physiology, University of North Carolina at Chapel Hill, Chapel Hill, NC, 27599, USA.ORCID http://orcid.org/0000-0001-9114-9836
Angela M MabbNeuroscience Institute, Georgia State University, Atlanta, GA, 30303, USA.ORCID http://orcid.org/0000-0002-3000-8690
Bonnie Taylor-BlakeDepartment of Cell Biology and Physiology, University of North Carolina at Chapel Hill, Chapel Hill, NC, 27599, USA.
Jesse K NiehausUNC Neuroscience Center, University of North Carolina at Chapel Hill, Chapel Hill, NC, 27599, USA.ORCID http://orcid.org/0000-0002-6800-4134
William D ChronisterDepartment of Biochemistry and Molecular Genetics, University of Virginia School of Medicine, Charlottesville, VA, 22908, USA.
Hanqian MaoDepartment of Cell Biology and Physiology, University of North Carolina at Chapel Hill, Chapel Hill, NC, 27599, USA.
Jeremy M SimonUNC Neuroscience Center, University of North Carolina at Chapel Hill, Chapel Hill, NC, 27599, USA.ORCID http://orcid.org/0000-0003-3906-1663
Hong YuanDepartment of Radiology, University of North Carolina at Chapel Hill, Chapel Hill, NC, 27599, USA.
Zibo LiDepartment of Radiology, University of North Carolina at Chapel Hill, Chapel Hill, NC, 27599, USA.ORCID http://orcid.org/0000-0002-1063-0298
Michael J McConnellDepartment of Biochemistry and Molecular Genetics, University of Virginia School of Medicine, Charlottesville, VA, 22908, USA.
Mark J ZylkaDepartment of Cell Biology and Physiology, University of North Carolina at Chapel Hill, Chapel Hill, NC, 27599, USA. zylka@med.unc.edu.
University of North Carolina at Chapel Hill · USUniversity of Virginia · USGeorgia State University · US

Funding

UNC-CH CENTER FOR ENVIRONMENTAL HEALTH &SUSCEPTIBILITYP30ES010126 · NIEHS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Melissa A. Troester · 2001 to 2026
$36.3M
UNC Neuroscience Center Research Cores: MicroscopyP30NS045892 · NINDS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI ZYLKA, MARK J. · 2003 to 2022
$11.5M
Preclinical CoreU54HD079124 · NICHD · UNIV OF NORTH CAROLINA CHAPEL HILL · PI MOY, SHERYL S · 2013 to 2019
$8.0M
Environmental-use chemicals that target pathways linked to autism and other neurodevelopmental disordersR35ES028366 · NIEHS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Mark J. Zylka · 2019 to 2026
$6.8M
The Elongation Hypothesis of AutismDP1ES024088 · NIEHS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI ZYLKA, MARK J. · 2013 to 2017
$3.8M
Transcription-associated DNA damage and neurodegenerationR56AG058663 · NIA · UNIV OF NORTH CAROLINA CHAPEL HILL · PI MCCONNELL, MICHAEL J., ZYLKA, MARK J. · 2018 to 2018
$709k
Identification of candidate environmental risks for autismR56ES028236 · NIEHS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI ZYLKA, MARK J. · 2017 to 2017
$250k
NIA NIH HHS R56 AG058663NICHD NIH HHS U54 HD079124NIEHS NIH HHS DP1 ES024088NIEHS NIH HHS P30 ES010126NIEHS NIH HHS R35 ES028366NIEHS NIH HHS R56 ES028236NINDS NIH HHS P30 NS045892
6 · The paper itself

Abstract

Topoisomerase 1 (TOP1) relieves torsional stress in DNA during transcription and facilitates the expression of long (>100 kb) genes, many of which are important for neuronal functions. To evaluate how loss of Top1 affected neurons in vivo, we conditionally deleted (cKO) Top1 in postmitotic excitatory neurons in the mouse cerebral cortex and hippocampus. Top1 cKO neurons develop properly, but then show biased transcriptional downregulation of long genes, signs of DNA damage, neuroinflammation, increased poly(ADP-ribose) polymerase-1 (PARP1) activity, single-cell somatic mutations, and ultimately degeneration. Supplementation of nicotinamide adenine dinucleotide (NAD

Indexed as

Genomic InstabilityAnimalsApoptosisCerebral CortexDNA DamageDNA Topoisomerases, Type IHippocampusInflammationMiceMice, KnockoutMortality, PrematureMotor ActivityMutationNADNeurodegenerative DiseasesNeuronsDNA Topoisomerases, Type INADNiacinamidenicotinamide-beta-ribosideParp1 protein, mousePoly (ADP-Ribose) Polymerase-1Pyridinium Compounds

Identifiers

PMID32327659
PMCPMC7181881
OpenAlexW3018223713

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.