Evidence map›Paper›PMID 32325051›Full record

ArticleCell host & microbe2020

Critical Anti-CRISPR Locus Repression by a Bi-functional Cas9 Inhibitor.

Beatriz A Osuna, Shweta Karambelkar, Caroline Mahendra, Anne Sarbach, Matthew C Johnson, Samuel Kilcher, Joseph Bondy-Denomy

Open access · bronzeAbstract read
In one paragraph

Article in Cell host & microbe, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
4.8field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 70 citations in OpenAlex.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Beatriz A OsunaDepartment of Microbiology and Immunology, University of California, San Francisco, San Francisco, CA 94158, USA.
Shweta KarambelkarDepartment of Microbiology and Immunology, University of California, San Francisco, San Francisco, CA 94158, USA.
Caroline MahendraDepartment of Microbiology and Immunology, University of California, San Francisco, San Francisco, CA 94158, USA.
Anne SarbachInstitute of Food, Nutrition, and Health, ETH Zurich, Zurich CH 8092, Switzerland.
Matthew C JohnsonDepartment of Microbiology and Immunology, University of California, San Francisco, San Francisco, CA 94158, USA.
Samuel KilcherInstitute of Food, Nutrition, and Health, ETH Zurich, Zurich CH 8092, Switzerland. Electronic address: samuel.kilcher@hest.ethz.ch.
Joseph Bondy-DenomyDepartment of Microbiology and Immunology, University of California, San Francisco, San Francisco, CA 94158, USA; Quantitative Biosciences Institute, University of California, San Francisco, San Francisco, CA 94158, USA; Innovative Genomics Institute, Berkeley, CA, USA. Electronic address: joseph.bondy-denomy@ucsf.edu.
University of California, San Francisco · USETH Zurich · CHQB3 · US

Funding

BMI Bioinformatics Training GrantsT32GM067547 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI HERNANDEZ, RYAN D. · 2003 to 2022
$6.6M
Discovering New Roles for CRISPR-Cas in Bacterial PathogenesisDP5OD021344 · OD · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI BONDY-DENOMY, JOSEPH · 2015 to 2019
$2.1M
Uncovering the mechanism and role of a widespread anti-CRISPR-Cas9 proteinR01GM127489 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI BONDY-DENOMY, JOSEPH · 2018 to 2022
$1.7M
NIGMS NIH HHS R01 GM127489NIGMS NIH HHS T32 GM067547NIH HHS DP5 OD021344
6 · The paper itself

Abstract

Bacteriophages must rapidly deploy anti-CRISPR proteins (Acrs) to inactivate the RNA-guided nucleases that enforce CRISPR-Cas adaptive immunity in their bacterial hosts. Listeria monocytogenes temperate phages encode up to three anti-Cas9 proteins, with acrIIA1 always present. AcrIIA1 binds and inhibits Cas9 with its C-terminal domain; however, the function of its highly conserved N-terminal domain (NTD) is unknown. Here, we report that the AcrIIA1

Indexed as

CRISPR-Cas SystemsBacterial ProteinsBacteriophagesClustered Regularly Interspaced Short Palindromic RepeatsCRISPR-Associated Protein 9DNA-Binding ProteinsGene Expression RegulationGenetic EngineeringHost-Pathogen InteractionsListeria monocytogenesPromoter Regions, GeneticProtein BindingRepressor ProteinsViral ProteinsBacterial ProteinsCRISPR-Associated Protein 9DNA-Binding ProteinsRepressor ProteinsViral Proteinsanti-anti-CRISPRanti-CRISPRautorepressionbacteriophageCas9CRISPR-CasListeria monocytogenes

Identifiers

PMID32325051
PMCPMC7351615
OpenAlexW3019652855

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.