Evidence map›Paper›PMID 32323199›Full record

ArticleJournal of microbiology (Seoul, Korea)2020

Phenotypic characterization of a conserved inner membrane protein YhcB in Escherichia coli.

Chul Gi Sung, Umji Choi, Chang-Ro Lee

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Article in Journal of microbiology (Seoul, Korea), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Chul Gi SungDepartment of Biological Sciences, Myongji University, Yongin, 17058, Republic of Korea.
Umji ChoiDepartment of Biological Sciences, Myongji University, Yongin, 17058, Republic of Korea.
Chang-Ro LeeDepartment of Biological Sciences, Myongji University, Yongin, 17058, Republic of Korea. crlee@mju.ac.kr.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Although bacteria have diverse membrane proteins, the function of many of them remains unknown or uncertain even in Escherichia coli. In this study, to investigate the function of hypothetical membrane proteins, genome-wide analysis of phenotypes of hypothetical membrane proteins was performed under various envelope stresses. Several genes responsible for adaptation to envelope stresses were identified. Among them, deletion of YhcB, a conserved inner membrane protein of unknown function, caused high sensitivities to various envelope stresses and increased membrane permeability, and caused growth defect under normal growth conditions. Furthermore, yhcB deletion resulted in morphological aberration, such as branched shape, and cell division defects, such as filamentous growth and the generation of chromosome-less cells. The analysis of antibiotic susceptibility showed that the yhcB mutant was highly susceptible to various anti-folate antibiotics. Notably, all phenotypes of the yhcB mutant were completely or significantly restored by YhcB without the transmembrane domain, indicating that the localization of YhcB on the inner membrane is dispensable for its function. Taken together, our results demonstrate that YhcB is involved in cell morphology and cell division in a membrane localization-independent manner.

Indexed as

Anti-Bacterial AgentsCell DivisionCell MembraneCell Membrane PermeabilityEscherichia coliEscherichia coli ProteinsGene DeletionMembrane ProteinsMicrobial Sensitivity TestsOxidoreductasesPhenotypeStress, PhysiologicalAnti-Bacterial AgentsEscherichia coli ProteinsMembrane ProteinsOxidoreductasesYhcB protein, E colianti-folate antibioticsbranched shapedivision defectEscherichia colimembrane proteinmorphology

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.