Evidence map›Paper›PMID 32322000›Full record

ArticleScientific reports2020

Proteomic analysis of knee cartilage reveals potential signaling pathways in pathological mechanism of Kashin-Beck disease compared with osteoarthritis.

Jian Lei, Abebe Feyissa Amhare, Liyun Wang, Yizhen Lv, Huan Deng, Hang Gao, Xiong Guo, Jing Han, Mikko J Lammi

Open access · goldAbstract readComparative Study
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
3.5field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 21 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 3 countries.

Jian LeiSchool of Public Health, Health Science Center; Key Laboratory of Environment and Gene Related Diseases of Ministry Education; Key Laboratory of Trace Elements and Endemic Diseases, Ministry of Health, Xi'an Jiaotong University, Xi'an, Shaanxi, 710061, P. R. China.
Abebe Feyissa AmhareSchool of Public Health, Health Science Center; Key Laboratory of Environment and Gene Related Diseases of Ministry Education; Key Laboratory of Trace Elements and Endemic Diseases, Ministry of Health, Xi'an Jiaotong University, Xi'an, Shaanxi, 710061, P. R. China.ORCID http://orcid.org/0000-0001-5252-3653
Liyun WangSchool of Public Health, Health Science Center; Key Laboratory of Environment and Gene Related Diseases of Ministry Education; Key Laboratory of Trace Elements and Endemic Diseases, Ministry of Health, Xi'an Jiaotong University, Xi'an, Shaanxi, 710061, P. R. China.
Yizhen LvSchool of Public Health, Health Science Center; Key Laboratory of Environment and Gene Related Diseases of Ministry Education; Key Laboratory of Trace Elements and Endemic Diseases, Ministry of Health, Xi'an Jiaotong University, Xi'an, Shaanxi, 710061, P. R. China.
Huan DengSchool of Public Health, Health Science Center; Key Laboratory of Environment and Gene Related Diseases of Ministry Education; Key Laboratory of Trace Elements and Endemic Diseases, Ministry of Health, Xi'an Jiaotong University, Xi'an, Shaanxi, 710061, P. R. China.
Hang GaoLaboratory of Resource Biology and Biotechnology in Western China (Ministry of Education), Provincial Key Laboratory of Biotechnology, College of Life Sciences, Northwest University, Xi'an, Shaanxi, 710069, P. R. China.
Xiong GuoSchool of Public Health, Health Science Center; Key Laboratory of Environment and Gene Related Diseases of Ministry Education; Key Laboratory of Trace Elements and Endemic Diseases, Ministry of Health, Xi'an Jiaotong University, Xi'an, Shaanxi, 710061, P. R. China.
Jing HanSchool of Public Health, Health Science Center; Key Laboratory of Environment and Gene Related Diseases of Ministry Education; Key Laboratory of Trace Elements and Endemic Diseases, Ministry of Health, Xi'an Jiaotong University, Xi'an, Shaanxi, 710061, P. R. China. bbbishop@126.com.ORCID http://orcid.org/0000-0003-1460-0114
Mikko J LammiSchool of Public Health, Health Science Center; Key Laboratory of Environment and Gene Related Diseases of Ministry Education; Key Laboratory of Trace Elements and Endemic Diseases, Ministry of Health, Xi'an Jiaotong University, Xi'an, Shaanxi, 710061, P. R. China.ORCID http://orcid.org/0000-0002-6181-9904
Ministry of Education · BDMinistry of Education of the People's Republic of China · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The pathological mechanism of Kashin-Beck disease (KBD), an endemic osteoarthritic disease, remains to be poorly understood. This study was designed to identify signaling pathways and crucial proteins involved in the pathological mechanism of KBD compared with osteoarthritis (OA). The knee cartilage samples were collected from gender- and age-matched KBD (n = 9) and OA (n = 9) patients. After pre-processing, samples were labeled with Tamdem Mass Tags 6plex multiplex kit, and analyzed by liquid chromatography-tandem mass spectrometry. Proteomic results were analyzed with gene ontology (GO), Kyoto Encyclopedia of Genes and Genomes (KEGG), and protein-protein interactions (PPI). The differential abundance proteins from KBD and OA were validated using western blot analysis. As a result, A total number of 375 proteins were identified to have differential abundance between KBD and OA, of which 121 and 254 proteins were observed to be up-regulated or down-regulated in KBD group. GO analysis shows that the differential abundant proteins are associated with cell junction and signal transducer activity from extracellular to intracellular. KEGG pathways enrichment and PPI network indicate four major pathways, including extracellular matrix -receptor interaction, focal adhesion, phosphatidylinositol 3-kinase (PI3K)-Protein kinase B (Akt), and Ras signaling pathways were involved in the degeneration of cartilage. Moreover, integrins, laminins, NF-κB and other regulative molecules were found as crucial proteins. In conclusion, our results demonstrated that compared with OA, the differential abundance proteins and signaling pathways may contribute to the occurrence and development of joint damage in KBD. Further investigation of their regulative roles and interaction may provide new insights into the pathological mechanisms and therapeutic targets for KBD.

Indexed as

ProteomicsSignal TransductionAgedCartilage, ArticularFemaleGene OntologyHumansKashin-Beck DiseaseKnee JointMaleMiddle AgedMolecular Sequence AnnotationOsteoarthritisProtein Interaction MapsProteomeReproducibility of ResultsProteome

Identifiers

PMID32322000
PMCPMC7176695
OpenAlexW3019147441

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.