Evidence map›Paper›PMID 32321966›Full record

ArticleScientific reports2020

Transcriptional regulation of amino acid metabolism in response to nitrogen deficiency and nitrogen forms in tea plant root (Camellia sinensis L.).

Tianyuan Yang, Huiping Li, Yuling Tai, Chunxia Dong, Xunmin Cheng, Enhua Xia, Ziping Chen, Fang Li, Xiaochun Wan, Zhaoliang Zhang

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
12.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 97 citations in OpenAlex.

  1. Review
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  14. Horticulture research · 2023
    Article
  15. Article
  16. Ammonium-nitrate mixtures dominated by NHFrontiers in plant science · 2023
    Article
  17. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Tianyuan Yang *State Key Laboratory of Tea Biology and Utilization, Anhui Agricultural University, Hefei, China.
Huiping Li *State Key Laboratory of Tea Biology and Utilization, Anhui Agricultural University, Hefei, China.
Yuling Tai *State Key Laboratory of Tea Biology and Utilization, Anhui Agricultural University, Hefei, China.
Chunxia DongState Key Laboratory of Tea Biology and Utilization, Anhui Agricultural University, Hefei, China.
Xunmin ChengState Key Laboratory of Tea Biology and Utilization, Anhui Agricultural University, Hefei, China.
Enhua XiaState Key Laboratory of Tea Biology and Utilization, Anhui Agricultural University, Hefei, China.
Ziping ChenState Key Laboratory of Tea Biology and Utilization, Anhui Agricultural University, Hefei, China.
Fang LiState Key Laboratory of Tea Biology and Utilization, Anhui Agricultural University, Hefei, China.
Xiaochun WanState Key Laboratory of Tea Biology and Utilization, Anhui Agricultural University, Hefei, China. xcwan@ahau.edu.cn.
Zhaoliang ZhangState Key Laboratory of Tea Biology and Utilization, Anhui Agricultural University, Hefei, China. zhlzhang@ahau.edu.cn.
Anhui Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Free amino acids, including theanine, glutamine and glutamate, contribute greatly to the pleasant taste and multiple health benefits of tea. Amino acids in tea plants are mainly synthesized in roots and transported to new shoots, which are significantly affected by nitrogen (N) level and forms. However, the regulatory amino acid metabolism genes have not been systemically identified in tea plants. Here, we investigated the dynamic changes of free amino acid contents in response to N deficiency and forms in tea plant roots, and systemically identified the genes associated amino acid contents in individual metabolism pathways. Our results showed that glutamate-derived amino acids are the most dynamic in response to various forms of N and N deficiency. We then performed transcriptomic analyses of roots treated with N deficiency and various forms of N, and differentially expressed amino acid metabolic genes in each pathway were identified. The analyses on expression patterns and transcriptional responses of metabolic genes to N treatments provided novel insights for the molecular basis of high accumulation of theanine in tea plant root. These analyses also identified potential regulatory genes in dynamic amino acid metabolism in tea plant root. Furthermore, our findings indicated that the dynamic expression levels of CsGDH, CsAlaDC, CsAspAT, CsSDH, CsPAL, CsSHMT were highly correlated with changes of amino acid contents in their corresponding pathways. Herein, this study provides comprehensive insights into transcriptional regulation of amino acid metabolism in response to nitrogen deficiency and nitrogen forms in tea plant root.

Indexed as

Gene Expression Regulation, PlantTranscription, GeneticAmino AcidsCamellia sinensisNitrogenPlant RootsAmino AcidsNitrogen

Identifiers

PMID32321966
PMCPMC7176667
OpenAlexW3019221274

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.