Evidence map›Paper›PMID 32321820›Full record

ArticleJournal of virology2020

Impact of HLA-B*52:01-Driven Escape Mutations on Viral Replicative Capacity.

Ming-Han Chloe Tsai, Supriya Singh, Emily Adland, Philip Goulder

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.8field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Ming-Han Chloe TsaiDepartment of Paediatrics, University of Oxford, Oxford, United Kingdom chloe.tsai@crick.ac.uk.
Supriya SinghDepartment of Biotechnology, National Centre for Disease Control, Delhi, India.
Emily AdlandDepartment of Paediatrics, University of Oxford, Oxford, United Kingdom.
Philip GoulderDepartment of Paediatrics, University of Oxford, Oxford, United Kingdom.
University of Oxford · GBNational Center for Disease Control · IN

Funding

Maximising Cure Potential in Paediatric HIV InfectionR01AI133673 · NIAID · UNIVERSITY OF OXFORD · PI GOULDER, PHILIP J · 2017 to 2021
$1.4M
NIAID NIH HHS R01 AI133673Wellcome TrustWellcome Trust WT104748MA
6 · The paper itself

Abstract

HLA-B*52:01 is strongly associated with protection against HIV disease progression. However, the mechanisms of HLA-B*52:01-mediated immune control have not been well studied. We here describe a cohort with a majority of HIV C-clade-infected individuals from Delhi, India, where HLA-B*52:01 is highly prevalent (phenotypic frequency, 22.5%). Consistent with studies of other cohorts, expression of HLA-B*52:01 was associated with high absolute CD4 counts and therefore a lack of HIV disease progression. We here examined the impact of HLA-B*52:01-associated viral polymorphisms within the immunodominant C clade Gag epitope RMTSPVSI (here, RI8; Gag residues 275 to 282) on viral replicative capacity (VRC) since HLA-mediated reduction in VRC is a central mechanism implicated in HLA-associated control of HIV. We observed in HLA-B*52:01-positive individuals a higher frequency of V280T, V280S, and V280A variants within RI8 (

Indexed as

AdultCohort StudiesEpitopes, T-LymphocyteFemalegag Gene Products, Human Immunodeficiency VirusGenes, MHC Class IGenotypeHIV-1HIV Core Protein p24HIV InfectionsHLA-B52 AntigenHumansImmune EvasionImmunodominant EpitopesMaleMutationEpitopes, T-Lymphocytegag Gene Products, Human Immunodeficiency VirusHIV Core Protein p24HLA-B*52:01 antigenHLA-B52 AntigenImmunodominant EpitopesC cladecompensatory mutationCTLescape mutationHLAHLA-B*52:01human immunodeficiency virusIndianp24 Gagviral replicative capacity

Identifiers

PMID32321820
PMCPMC7307159
OpenAlexW3018288350

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.