Evidence map›Paper›PMID 32321756›Full record

ArticleJournal of immunology (Baltimore, Md. : 1950)2020

Structure of MHC-Independent TCRs and Their Recognition of Native Antigen CD155.

Jinghua Lu, François Van Laethem, Ingrid Saba, Jonathan Chu, Anastasia N Tikhonova, Abhisek Bhattacharya, Alfred Singer, Peter D Sun

Open access · bronzeAbstract read
In one paragraph

Article in Journal of immunology (Baltimore, Md. : 1950), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.3field-weighted citation impact, top 44% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. SARS-CoV-2 spike does not interact with the T cell receptor or directly activate T cells.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  3. Article
  4. A conserved element in the first intron ofFrontiers in immunology · 2024
    Article
  5. Article
  6. Review
  7. Article
  8. Coreceptors and TCR Signaling - the Strong and the Weak of It.Frontiers in cell and developmental biology · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Jinghua LuStructural Immunology Section, Laboratory of Immunogenetics, National Institute of Allergy and Infectious Diseases, Rockville, MD 20852; and.
François Van LaethemExperimental Immunology Branch, National Cancer Institute, Bethesda, MD 20892.
Ingrid SabaExperimental Immunology Branch, National Cancer Institute, Bethesda, MD 20892.ORCID 0000-0003-0851-421X
Jonathan ChuStructural Immunology Section, Laboratory of Immunogenetics, National Institute of Allergy and Infectious Diseases, Rockville, MD 20852; and.ORCID 0000-0002-8520-1439
Anastasia N TikhonovaExperimental Immunology Branch, National Cancer Institute, Bethesda, MD 20892.
Abhisek BhattacharyaExperimental Immunology Branch, National Cancer Institute, Bethesda, MD 20892.ORCID 0000-0002-1667-7169
Alfred SingerExperimental Immunology Branch, National Cancer Institute, Bethesda, MD 20892.ORCID 0000-0002-6780-5108
Peter D SunStructural Immunology Section, Laboratory of Immunogenetics, National Institute of Allergy and Infectious Diseases, Rockville, MD 20852; and psun@nih.gov.
National Cancer Institute · USNational Institute of Allergy and Infectious Diseases · US

Funding

Structural Characterization Of ProteinsZIAAI000697 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI SUN, PETER D. · 2009 to 2025
$12.3M
MHC-independent T cellsZIABC011116 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI SINGER, ALFRED · 2009 to 2025
$12.3M
T Cell Differentiation and Repertoire SelectionZIABC009273 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI SINGER, ALFRED · 2009 to 2025
$11.6M
Development and function of regulatory T cellsZIABC011112 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI SINGER, ALFRED · 2009 to 2025
$6.8M
Role of microRNAs in T cell developmentZIABC011114 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI SINGER, ALFRED · 2009 to 2023
$4.8M
T cell receptor regulation of cytokine signalingZIABC011117 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI SINGER, ALFRED · 2009 to 2023
$4.8M
Specification of T cell function during developmentZIABC011106 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI SINGER, ALFRED · 2009 to 2023
$4.8M
Cytokine signaling in developing thymocytes and T cellsZIABC011111 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI SINGER, ALFRED · 2009 to 2023
$4.8M
T cell survivalZIABC011113 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI SINGER, ALFRED · 2009 to 2023
$4.8M
T CELL DIFFERENTIATION AND REPERTOIRE SELECTIONZ01BC009273 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI SINGER, ALFRED · 1996 to 2008
$2.9M
Intramural NIH HHS Z01 BC009273Intramural NIH HHS Z99 CA999999Intramural NIH HHS ZIA AI000697Intramural NIH HHS ZIA BC009273Intramural NIH HHS ZIA BC011116
6 · The paper itself

Abstract

During normal T cell development in the thymus, αβ TCRs signal immature thymocytes to differentiate into mature T cells by binding to peptide-MHC ligands together with CD4/CD8 coreceptors. Conversely, in MHC and CD4/CD8 coreceptor-deficient mice, the thymus generates mature T cells expressing MHC-independent TCRs that recognize native conformational epitopes rather than linear antigenic-peptides presented by MHC. To date, no structural information of MHC-independent TCRs is available, and their structural recognition of non-MHC ligand remains unknown. To our knowledge in this study, we determined the first structures of two murine MHC-independent TCRs (A11 and B12A) that bind with high nanomolar affinities to mouse adhesion receptor CD155. Solution binding demonstrated the Vαβ-domain is responsible for MHC-independent B12A recognition of its ligand. Analysis of A11 and B12A sequences against various MHC-restricted and -independent TCR sequence repertoires showed that individual V-genes of A11 and B12A did not exhibit preference against MHC-restriction. Likewise, CDR3 alone did not discriminate against MHC binding, suggesting VDJ recombination together with Vα/Vβ pairing determine their MHC-independent specificity for CD155. The structures of A11 and B12A TCR are nearly identical to those of MHC-restricted TCR, including the conformations of CDR1 and 2. Mutational analysis, together with negative-staining electron microscopy images, showed that the CDR regions of A11 and B12A recognized epitopes on D1 domain of CD155, a region also involved in CD155 binding to poliovirus and Tactile in human. Taken together, MHC-independent TCRs adopt canonical TCR structures to recognize native Ags, highlighting the importance of thymic selection in determining TCR ligand specificity.

Indexed as

AnimalsHEK293 CellsHumansLigandsMajor Histocompatibility ComplexMicePeptidesPoliovirusProtein BindingProtein DomainsReceptors, Antigen, T-Cell, alpha-betaReceptors, VirusThymocytesV(D)J RecombinationLigandsPeptidespoliovirus receptorReceptors, Antigen, T-Cell, alpha-betaReceptors, Virus

Identifiers

PMID32321756
PMCPMC7390066
OpenAlexW3018847901

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.