Evidence map›Paper›PMID 32319552›Full record

ArticleInternational journal of molecular medicine2020

Genome‑wide DNA methylation regulation analysis of long non‑coding RNAs in glioblastoma.

Jianghuai Ji, Lei Zhao, Xiaoxiao Zhao, Qianpeng Li, Yi An, Li Li, Dongguo Li

Open access · hybridAbstract read
In one paragraph

Article in International journal of molecular medicine, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
0.8field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Review
  8. Emerging Role of Non-Coding RNAs in Senescence.Frontiers in cell and developmental biology · 2022
    Review
  9. Review
  10. Article
  11. Article
  12. Review
  13. Long Non-CodingNon-coding RNA · 2021
    Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Jianghuai JiSchool of Biomedical Engineering, Capital Medical University, Beijing 100069, P.R. China.
Lei ZhaoDepartment of Anesthesiology, Xuanwu Hospital, Capital Medical University, Beijing 100053, P.R. China.
Xiaoxiao ZhaoSchool of Biomedical Engineering, Capital Medical University, Beijing 100069, P.R. China.
Qianpeng LiSchool of Biomedical Engineering, Capital Medical University, Beijing 100069, P.R. China.
Yi AnDepartment of Anesthesiology, Xuanwu Hospital, Capital Medical University, Beijing 100053, P.R. China.
Li LiLuoyang Central Hospital Affiliated To Zhengzhou University, Luoyang, Henan 471009, P.R. China.
Dongguo LiSchool of Biomedical Engineering, Capital Medical University, Beijing 100069, P.R. China.
Capital Medical University · CNLuoyang Central Hospital Affiliated to Zhengzhou University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Glioblastoma (GBM) is a malignant brain tumor associated with high mortality. Long non‑coding RNAs (lncRNAs) are increasingly being recognized as its modulators. However, it remains mostly unexplored how lncRNAs are mediated by DNA methylation in GBM. The present study integrated multi‑omics data to analyze the epigenetic dysregulation of lncRNAs in GBM. Widely aberrant methylation in the lncRNA promoters was observed, and the lncRNA promoters exhibited a more hypomethylated pattern in GBM. By combining transcriptional datasets, it was possible identify the lncRNAs whose transcriptional changes might be associated with the aberrant promoter methylation. Then, a methylation‑mediated lncRNA regulatory network and functional enrichment analysis of aberrantly methylated lncRNAs showed that lncRNAs with different methylation patterns were involved in diverse GBM progression‑related biological functions and pathways. Specifically, four lncRNAs whose increased expression may be regulated by the corresponding promoter hypomethylation were evaluated to have an excellent diagnostic effect and clinical prognostic value. Finally, through the construction of drug‑target association networks, the present study identified potential therapeutic targets and small‑molecule drugs for GBM treatment. The present study provides novel insights for understanding the regulation of lncRNAs by DNA methylation and developing cancer biomarkers in GBM.

Indexed as

BiomarkersDNA MethylationEpigenesis, GeneticGene Expression ProfilingGene Expression Regulation, NeoplasticGlioblastomaHumansPromoter Regions, GeneticRNA, Long NoncodingBiomarkersRNA, Long Noncoding

Identifiers

PMID32319552
PMCPMC7255472
OpenAlexW3017345619

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.