Evidence map›Paper›PMID 32319263›Full record

ArticleJournal of biomedical optics2020

Quantitative spectral quality assessment technique validated using intraoperative in vivo Raman spectroscopy measurements.

Frédérick Dallaire, Fabien Picot, Jean-Philippe Tremblay, Guillaume Sheehy, Émile Lemoine, Rajeev Agarwal, Samuel Kadoury, Dominique Trudel, Frédéric Lesage, Kevin Petrecca and 1 more

Open access · goldAbstract readLetter
In one paragraph

Article in Journal of biomedical optics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 25 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

Frédérick DallairePolytechnique Montréal, Department of Computer Engineering and Software Engineering, Montréal, Québe, Canada.
Fabien PicotCentre de Recherche du Centre Hospitalier de l'Université de Montréal, Montréal, Québec, Canada.
Jean-Philippe TremblayPolytechnique Montréal, Department of Electrical Engineering Montréal, Québec, Canada.
Guillaume SheehyCentre de Recherche du Centre Hospitalier de l'Université de Montréal, Montréal, Québec, Canada.
Émile LemoineCentre de Recherche du Centre Hospitalier de l'Université de Montréal, Montréal, Québec, Canada.
Rajeev AgarwalODS Medical Inc., Montréal, Québec, Canada.
Samuel KadouryPolytechnique Montréal, Department of Computer Engineering and Software Engineering, Montréal, Québe, Canada.
Dominique TrudelCentre de Recherche du Centre Hospitalier de l'Université de Montréal, Montréal, Québec, Canada.
Frédéric LesageCentre de Recherche du Centre Hospitalier de l'Université de Montréal, Montréal, Québec, Canada.
Kevin PetreccaMcGill University, Montreal Neurological Institute and Hospital, Brain Tumour Research Center, Depar, Canada.
Frédéric LeblondCentre de Recherche du Centre Hospitalier de l'Université de Montréal, Montréal, Québec, Canada.
Centre Hospitalier de l’Université de Montréal · CAPolytechnique Montréal · CAMcGill University · CA

Funding

CIHR
6 · The paper itself

Abstract

significanceEnsuring spectral quality is prerequisite to Raman spectroscopy applied to surgery. This is because the inclusion of poor-quality spectra in the training phase of Raman-based pathology detection models can compromise prediction robustness and generalizability to new data. Currently, there exists no quantitative spectral quality assessment technique that can be used to either reject low-quality data points in existing Raman datasets based on spectral morphology or, perhaps more importantly, to optimize the in vivo data acquisition process to ensure minimal spectral quality standards are met.

aimTo develop a quantitative method evaluating Raman signal quality based on the variance associated with stochastic noise in important tissue bands, including C─C stretch, CH2  /  CH3 deformation, and the amide bands. APPROACH: A single-point hand-held Raman spectroscopy probe system was used to acquire 315 spectra from 44 brain cancer patients. All measurements were classified as either high or low quality based on visual assessment (qualitative) and using a quantitative quality factor (QF) metric. Receiver-operator-characteristic (ROC) analyses were performed to evaluate the performance of the quantitative metric to assess spectral quality and improve cancer detection accuracy.

resultsThe method can separate high- and low-quality spectra with a sensitivity of 89% and a specificity of 90% which is shown to increase cancer detection sensitivity and specificity by up to 20% and 12%, respectively.

conclusionsThe QF threshold is effective in stratifying spectra in terms of spectral quality and the observed false negatives and false positives can be linked to limitations of qualitative spectral quality assessment.

Indexed as

Brain NeoplasmsSpectrum Analysis, RamanHumansSensitivity and Specificityfluorescencemachine learningRaman spectroscopysignal processingsurgerytissue optics

Identifiers

PMID32319263
PMCPMC7171512
OpenAlexW3017229058

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.